WormBase Tree Display for Gene: WBGene00001441
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WBGene00001441 | SMap | S_parent | Sequence | K03C7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | fkh-9 | Person_evidence | WBPerson411 | |||||
Sequence_name | K03C7.2 | ||||||||
Molecular_name (12) | |||||||||
Other_name | CELE_K03C7.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | fkh-9 | ||||||||
DB_info | Database | AceView | gene | XE436 | |||||
WormQTL | gene | WBGene00001441 | |||||||
WormFlux | gene | WBGene00001441 | |||||||
NDB | locus_tag | CELE_K03C7.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001441|UniProtKB=Q21187 | |||||||
family | PTHR11829 | ||||||||
NCBI | gene | 180670 | |||||||
RefSeq | protein | NM_001029590.7 | |||||||
NM_001392752.1 | |||||||||
NM_001029589.4 | |||||||||
SwissProt | UniProtAcc | Q21187 | |||||||
UniProt_GCRP | UniProtAcc | Q21187 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fkh | ||||||||
Allele (133) | |||||||||
Strain | WBStrain00036971 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (24) | |||||||||
Ortholog (35) | |||||||||
Paralog | WBGene00001434 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001438 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001440 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00003017 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003976 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00004013 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006853 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00002601 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001442 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00000912 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | fkh-9 encodes a member of the forkhead domain transcription factor family. | Paper_evidence | WBPaper00005730 | |||||
Curator_confirmed | WBPerson48 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enables DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including axon regeneration; determination of adult lifespan; and learning or memory. Acts upstream of or within ERAD pathway and defense response to other organism. Located in nucleus. Expressed in several structures, including intestine; neurons; pharyngeal-intestinal valve; rectal valve cell; and somatic nervous system. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K03C7.2a | |||||||
K03C7.2b | |||||||||
K03C7.2c | |||||||||
Corresponding_transcript | K03C7.2a.1 | ||||||||
K03C7.2b.1 | |||||||||
K03C7.2c.1 | |||||||||
K03C7.2c.2 | |||||||||
K03C7.2c.3 | |||||||||
K03C7.2c.4 | |||||||||
Other_sequence (20) | |||||||||
Associated_feature (25) | |||||||||
Transcription_factor | WBTranscriptionFactor000172 | ||||||||
Experimental_info | RNAi_result | WBRNAi00113577 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049806 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022899 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092043 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00107444 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (13) | |||||||||
Drives_construct | WBCnstr00010773 | ||||||||
WBCnstr00014254 | |||||||||
WBCnstr00014258 | |||||||||
WBCnstr00014329 | |||||||||
WBCnstr00014350 | |||||||||
WBCnstr00014354 | |||||||||
WBCnstr00022361 | |||||||||
WBCnstr00036945 | |||||||||
Construct_product | WBCnstr00022361 | ||||||||
WBCnstr00036945 | |||||||||
Microarray_results (31) | |||||||||
Expression_cluster (190) | |||||||||
Interaction (31) | |||||||||
Map_info | Map | X | Position | -9.33097 | Error | 0.020127 | |||
Positive | Positive_clone | K03C7 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference (15) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |