WormBase Tree Display for Gene: WBGene00003286
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WBGene00003286 | Evidence | Paper_evidence | WBPaper00004928 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y67D8A | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001265 | |||||
Gene_class | mir | ||||||
Allele | WBVar02151441 | ||||||
WBVar00090890 | |||||||
WBVar02151678 | |||||||
WBVar02151687 | |||||||
WBVar01498316 | |||||||
WBVar01499789 | |||||||
WBVar01499633 | |||||||
WBVar00897401 | |||||||
WBVar00897402 | |||||||
Strain | WBStrain00027508 | ||||||
WBStrain00027525 | |||||||
WBStrain00027592 | |||||||
WBStrain00027593 | |||||||
WBStrain00007202 | |||||||
WBStrain00007203 | |||||||
WBStrain00007204 | |||||||
WBStrain00007205 | |||||||
WBStrain00007209 | |||||||
In_cluster | BANTAM | ||||||
RNASeq_FPKM (74) | |||||||
Structured_description | Concise_description | mir-58.1 encodes a microRNA, a small non-protein coding RNA and is conserved in C. briggsae; mir-58.1 is expressed constitutively throughout development in normal worms and in glp-4(bn2) adults; many of the known microRNAs are involved in post-transcriptional regulation of genes. | Paper_evidence | WBPaper00004927 | |||
WBPaper00004928 | |||||||
WBPaper00005825 | |||||||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 20 Jan 2005 00:00:00 | ||||||
Automated_description | Expressed in several structures, including excretory cell; hypodermis; intestine; pharynx; and spermatheca. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_transcript | Y67D8A.4 | |||||
Y67D8A.4a | |||||||
Y67D8A.4b | |||||||
Gene_product_binds | WBsf977969 | ||||||
WBsf977970 | |||||||
WBsf977971 | |||||||
WBsf977972 | |||||||
Experimental_info | Expr_pattern | Expr2488 | |||||
Expr8461 | |||||||
Expr10927 | |||||||
Expr12847 | |||||||
Expr12855 | |||||||
Drives_construct | WBCnstr00013307 | ||||||
WBCnstr00022898 | |||||||
WBCnstr00022906 | |||||||
Regulate_expr_cluster | WBPaper00064080:miR-58_miRNA_interacting | ||||||
Expression_cluster (25) | |||||||
Interaction (14) | |||||||
Map_info | Map | IV | Position | -5.44068 | Error | 0.089176 | |
Positive | Positive_clone | Y67D8A | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference (23) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |