WormBase Tree Display for Gene: WBGene00004246
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| WBGene00004246 | SMap | S_parent | Sequence | Y48G1BL | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | CGC_name | puf-10 | Person_evidence | WBPerson320 | ||||||
| Sequence_name | Y48G1BL.3 | |||||||||
| Molecular_name | Y48G1BL.3 | |||||||||
| Other_name | CELE_Y48G1BL.3 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | puf-10 | |||||||||
| DB_info | Database | AceView | gene | 1A686 | ||||||
| WormQTL | gene | WBGene00004246 | ||||||||
| NDB | locus_tag | CELE_Y48G1BL.3 | ||||||||
| NCBI | gene | 171613 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 21 Jun 2005 16:07:15 | WBPerson1867 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | puf | |||||||||
| Allele (43) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00004243 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Enriched in germ line based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including Alovudine; Zidovudine; and metformin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y48G1BL.3:wp145 | ||||||||
| Corresponding_pseudogene | Y48G1BL.3 | |||||||||
| Other_sequence | Acan_isotig06631 | |||||||||
| Experimental_info | Microarray_results (16) | |||||||||
| Expression_cluster (85) | ||||||||||
| Interaction | WBInteraction000520230 | |||||||||
| Map_info | Map | I | Position | -19.1217 | Error | 0.004216 | ||||
| Positive | Positive_clone | Y48G1BL | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00006101 | |||||||||
| WBPaper00025088 | ||||||||||
| WBPaper00027224 | ||||||||||
| WBPaper00027310 | ||||||||||
| Remark | Sequence connection Y48G1C_55.G from [source DS Bernstein, MP Wickens] | |||||||||
| but this has become Y48G1BL.e according to Dan Lawson 141100 | ||||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||||
| Method | Gene |
