WormBase Tree Display for Gene: WBGene00004854

WBGene00004854 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 1
    Name: CGC_name: slt-1 Person_evidence: WBPerson42
      Sequence_name: F40E10.4
      Molecular_name: F40E10.4
        F40E10.4.1
        CE32412
      Other_name: CELE_F40E10.4 Accession_evidence: NDB BX284606
      Public_name: slt-1
    DB_info: Database: AceView gene XP301
        WormQTL gene WBGene00004854
        WormFlux gene WBGene00004854
        NDB locus_tag CELE_F40E10.4
        Panther gene CAEEL|WormBase=WBGene00004854|UniProtKB=G5EFX6
          family PTHR45836
        NCBI gene 181562
        RefSeq protein NM_078036.8
        SwissProt UniProtAcc G5EFX6
        TREEFAM TREEFAM_ID TF332887
        UniProt_GCRP UniProtAcc G5EFX6
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: slt
    Allele (191)
    Strain: WBStrain00034914
      WBStrain00005267
      WBStrain00005270
      WBStrain00005271
      WBStrain00005272
    RNASeq_FPKM (74)
    GO_annotation (26)
    Ortholog (37)
    Paralog: WBGene00007261 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013542 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020693 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00022129 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description (2)
  Disease_info: Potential_model: DOID:13207 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11086)
      DOID:0080745 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11086)
      DOID:10223 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11086)
      DOID:0060224 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11086)
  Molecular_info: Corresponding_CDS: F40E10.4
    Corresponding_CDS_history: F40E10.4:wp90
    Corresponding_transcript: F40E10.4.1
    Other_sequence (11)
    Associated_feature: WBsf648747
      WBsf648748
      WBsf663583
      WBsf663584
      WBsf663585
      WBsf717401
      WBsf236701
      WBsf236702
      WBsf236703
  Experimental_info: RNAi_result: WBRNAi00011228 Inferred_automatically: RNAi_primary
      WBRNAi00086123 Inferred_automatically: RNAi_primary
      WBRNAi00001158 Inferred_automatically: RNAi_primary
      WBRNAi00046840 Inferred_automatically: RNAi_primary
      WBRNAi00032019 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1639
      Expr8003
      Expr1016319
      Expr1032406
      Expr1150710
      Expr2015887
      Expr2034120
    Drives_construct: WBCnstr00000844
      WBCnstr00008334
      WBCnstr00013053
      WBCnstr00035356
      WBCnstr00038306
    Construct_product: WBCnstr00000848
      WBCnstr00000849
      WBCnstr00000851
      WBCnstr00000852
      WBCnstr00035356
    Microarray_results (20)
    Expression_cluster (176)
    Interaction (102)
  Map_info: Map: X Position: 19.7628 Error: 0.06206
    Positive: Positive_clone: F40E10 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point (2)
    Pseudo_map_position
  Reference (74)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene