WormBase Tree Display for Gene: WBGene00007666
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| WBGene00007666 | SMap | S_parent | Sequence | C18B12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C18B12.4 | |||||||
| Molecular_name | C18B12.4 | ||||||||
| C18B12.4.1 | |||||||||
| CE18510 | |||||||||
| Other_name | CELE_C18B12.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C18B12.4 | ||||||||
| DB_info | Database | AceView | gene | XP656 | |||||
| WormQTL | gene | WBGene00007666 | |||||||
| WormFlux | gene | WBGene00007666 | |||||||
| NDB | locus_tag | CELE_C18B12.4 | |||||||
| NCBI | gene | 181600 | |||||||
| RefSeq | protein | NM_078097.6 | |||||||
| TrEMBL | UniProtAcc | Q9XX98 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XX98 | |||||||
| OMIM | gene | 609247 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (68) | |||||||||
| Strain | WBStrain00055366 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00104190 | ||||||||
| 00104191 | |||||||||
| 00104192 | |||||||||
| 00104193 | |||||||||
| 00104194 | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00019185 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00023404 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 73. Is an ortholog of human RNF13 (ring finger protein 13); RNF167 (ring finger protein 167); and ZNRF4 (zinc and ring finger 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112209 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10057) | ||||
| Molecular_info | Corresponding_CDS | C18B12.4 | |||||||
| Corresponding_transcript | C18B12.4.1 | ||||||||
| Other_sequence | Oden_isotig23411 | ||||||||
| CBC07888_1 | |||||||||
| Acan_isotig07924 | |||||||||
| JI167343.1 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00076150 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040900 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010981 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010977 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094657 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00063635 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00084234 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027004 | ||||||||
| Expr1033311 | |||||||||
| Expr1144947 | |||||||||
| Expr2000958 | |||||||||
| Expr2019179 | |||||||||
| Drives_construct | WBCnstr00033568 | ||||||||
| Construct_product | WBCnstr00033568 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction | WBInteraction000329592 | ||||||||
| WBInteraction000334681 | |||||||||
| WBInteraction000406763 | |||||||||
| WBInteraction000410807 | |||||||||
| WBInteraction000445937 | |||||||||
| Map_info | Positive | Positive_clone | C18B12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 21.8071 | |||||||
| Reference | WBPaper00027315 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
