WormBase Tree Display for Gene: WBGene00008018
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| WBGene00008018 | SMap | S_parent | Sequence | C38H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tbc-8 | Person_evidence | WBPerson524 | |||||
| WBPerson293 | |||||||||
| Sequence_name | C38H2.1 | ||||||||
| Molecular_name | C38H2.1a | ||||||||
| C38H2.1a.1 | |||||||||
| CE47567 | |||||||||
| C38H2.1b | |||||||||
| CE47487 | |||||||||
| C38H2.1b.1 | |||||||||
| Other_name | CELE_C38H2.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | tbc-8 | ||||||||
| DB_info | Database | AceView | gene | 3L461 | |||||
| WormQTL | gene | WBGene00008018 | |||||||
| WormFlux | gene | WBGene00008018 | |||||||
| NDB | locus_tag | CELE_C38H2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008018|UniProtKB=I2HAA0 | |||||||
| family | PTHR22957 | ||||||||
| NCBI | gene | 176454 | |||||||
| RefSeq | protein | NM_001268144.3 | |||||||
| NM_001268143.4 | |||||||||
| SwissProt | UniProtAcc | I2HAA0 | |||||||
| UniProt_GCRP | UniProtAcc | I2HAA0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 23 Jun 2008 18:34:24 | WBPerson2970 | Name_change | CGC_name | tbc-8 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tbc | ||||||||
| Allele (149) | |||||||||
| Strain | WBStrain00002756 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (40) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Enables small GTPase binding activity. Involved in dense core granule maturation. Located in Golgi cisterna; cytosol; and early endosome. Expressed in neurons. Is an ortholog of human SGSM2 (small G protein signaling modulator 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C38H2.1a | |||||||
| C38H2.1b | |||||||||
| Corresponding_CDS_history | C38H2.1:wp91 | ||||||||
| C38H2.1:wp196 | |||||||||
| C38H2.1:wp231 | |||||||||
| Corresponding_transcript | C38H2.1a.1 | ||||||||
| C38H2.1b.1 | |||||||||
| Other_sequence (29) | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042175 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006272 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022304 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113379 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113380 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1592 | ||||||||
| Expr4306 | |||||||||
| Expr5472 | |||||||||
| Expr10033 | |||||||||
| Expr14938 | |||||||||
| Expr1028934 | |||||||||
| Expr1033487 | |||||||||
| Expr1146170 | |||||||||
| Expr2017335 | |||||||||
| Expr2035471 | |||||||||
| Drives_construct | WBCnstr00003284 | ||||||||
| WBCnstr00011904 | |||||||||
| WBCnstr00015014 | |||||||||
| WBCnstr00019912 | |||||||||
| WBCnstr00033303 | |||||||||
| Construct_product | WBCnstr00019912 | ||||||||
| WBCnstr00033303 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | III | Position | 2.4777 | Error | 0.002122 | |||
| Positive | Positive_clone | C38H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028592 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041154 | |||||||||
| WBPaper00045066 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061970 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
