WormBase Tree Display for Gene: WBGene00009087
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WBGene00009087 | SMap | S_parent | Sequence | F23D12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F23D12.3 | |||||||
Molecular_name | F23D12.3 | ||||||||
F23D12.3.1 | |||||||||
CE05701 | |||||||||
Other_name | CELE_F23D12.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | F23D12.3 | ||||||||
DB_info | Database | AceView | gene | XP61 | |||||
WormQTL | gene | WBGene00009087 | |||||||
WormFlux | gene | WBGene00009087 | |||||||
NDB | locus_tag | CELE_F23D12.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009087|UniProtKB=Q19759 | |||||||
family | PTHR31712 | ||||||||
NCBI | gene | 184896 | |||||||
RefSeq | protein | NM_078002.5 | |||||||
TREEFAM | TREEFAM_ID | TF321463 | |||||||
TrEMBL | UniProtAcc | Q19759 | |||||||
UniProt_GCRP | UniProtAcc | Q19759 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (30) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (65) | |||||||||
Paralog | WBGene00010262 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00018258 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015322 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00010404 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015325 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in intestine and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by nine chemicals including rotenone; D-glucose; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF5354 and Family of unknown function (DUF5354). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F23D12.3 | |||||||
Corresponding_transcript | F23D12.3.1 | ||||||||
Associated_feature | WBsf1007907 | ||||||||
WBsf1007908 | |||||||||
WBsf1024401 | |||||||||
WBsf1024402 | |||||||||
WBsf236671 | |||||||||
WBsf236672 | |||||||||
Experimental_info | RNAi_result | WBRNAi00013813 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00045410 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026521 | ||||||||
Expr1149334 | |||||||||
Expr2002915 | |||||||||
Expr2021132 | |||||||||
Drives_construct | WBCnstr00032475 | ||||||||
Construct_product | WBCnstr00032475 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (123) | |||||||||
Map_info | Positive | Positive_clone | F23D12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | 16.7049 | |||||||
Reference | WBPaper00065158 | ||||||||
Method | Gene |