WormBase Tree Display for Gene: WBGene00009124
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| WBGene00009124 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | rtel-1 | Person_evidence | WBPerson1839 | |||||
| Sequence_name | F25H2.13 | ||||||||
| Molecular_name | F25H2.13 | ||||||||
| F25H2.13.1 | |||||||||
| CE15894 | |||||||||
| F25H2.13.2 | |||||||||
| Other_name | bch-1 | Person_evidence | WBPerson1839 | ||||||
| CELE_F25H2.13 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | rtel-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Sep 2006 10:43:24 | WBPerson1847 | Name_change | CGC_name | bch-1 | ||||
| 3 | 08 Aug 2008 11:22:27 | WBPerson2970 | Name_change | CGC_name | rtel-1 | ||||
| Other_name | bch-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rtel | ||||||||
| Allele (65) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (41) | |||||||||
| Contained_in_operon | CEOP1624 | ||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00001049 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00010839 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00044493 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021752 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity; DNA helicase activity; and DNA polymerase binding activity. Involved in regulation of double-strand break repair via homologous recombination. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in several diseases, including autosomal recessive dyskeratosis congenita 5; high grade glioma (multiple); and lung disease (multiple). Is an ortholog of human RTEL1 (regulator of telomere elongation helicase 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:5076 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15888) | ||||
| EFO:MONDO:0000148 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15888) | ||||||
| DOID:3083 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15888) | ||||||
| DOID:0050671 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15888) | ||||||
| DOID:3079 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15888) | ||||||
| DOID:0070022 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15888) | ||||||
| DOID:3717 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15888) | ||||||
| DOID:1324 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15888) | ||||||
| DOID:10283 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15888) | ||||||
| DOID:1909 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15888) | ||||||
| Molecular_info | Corresponding_CDS | F25H2.13 | |||||||
| Corresponding_transcript | F25H2.13.1 | ||||||||
| F25H2.13.2 | |||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf643698 | ||||||||
| WBsf985039 | |||||||||
| WBsf218458 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045537 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031390 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062217 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116928 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003456 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075593 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021204 | ||||||||
| Expr1033975 | |||||||||
| Expr1149451 | |||||||||
| Expr2015571 | |||||||||
| Expr2033806 | |||||||||
| Drives_construct | WBCnstr00037859 | ||||||||
| Construct_product | WBCnstr00037859 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | I | Position | 5.05584 | Error | 7.8e-05 | |||
| Positive | Positive_clone | F25H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (18) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
