WormBase Tree Display for Gene: WBGene00010047
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WBGene00010047 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F54D1.6 | |||||||
Molecular_name | F54D1.6 | ||||||||
F54D1.6.1 | |||||||||
CE37523 | |||||||||
Other_name | CELE_F54D1.6 | Accession_evidence | NDB | BX284604 | |||||
Public_name | F54D1.6 | ||||||||
DB_info | Database | AceView | gene | 4M59 | |||||
WormQTL | gene | WBGene00010047 | |||||||
WormFlux | gene | WBGene00010047 | |||||||
NDB | locus_tag | CELE_F54D1.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010047|UniProtKB=Q20762 | |||||||
family | PTHR23074 | ||||||||
NCBI | gene | 178037 | |||||||
RefSeq | protein | NM_069718.5 | |||||||
SwissProt | UniProtAcc | Q20762 | |||||||
TREEFAM | TREEFAM_ID | TF321321 | |||||||
UniProt_GCRP | UniProtAcc | Q20762 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (67) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00069062 | ||||||||
00069063 | |||||||||
00069064 | |||||||||
00117540 | |||||||||
Ortholog (37) | |||||||||
Paralog | WBGene00003183 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00017981 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00016045 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00021334 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011175 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00010540 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to be involved in cell-matrix adhesion. Predicted to be located in extracellular space. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F54D1.6 | |||||||
Corresponding_CDS_history | F54D1.6:wp132 | ||||||||
Corresponding_transcript | F54D1.6.1 | ||||||||
Other_sequence (57) | |||||||||
Associated_feature | WBsf660694 | ||||||||
WBsf660695 | |||||||||
WBsf716792 | |||||||||
WBsf717185 | |||||||||
WBsf718195 | |||||||||
WBsf997802 | |||||||||
WBsf229126 | |||||||||
WBsf229127 | |||||||||
WBsf229128 | |||||||||
WBsf229129 | |||||||||
Experimental_info | RNAi_result (19) | ||||||||
Expr_pattern | Expr1028175 | ||||||||
Expr1034379 | |||||||||
Expr1152085 | |||||||||
Expr2004132 | |||||||||
Expr2022356 | |||||||||
Drives_construct | WBCnstr00031710 | ||||||||
Construct_product | WBCnstr00031710 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (267) | |||||||||
Interaction | WBInteraction000366781 | ||||||||
WBInteraction000377371 | |||||||||
WBInteraction000393108 | |||||||||
WBInteraction000450087 | |||||||||
WBInteraction000455444 | |||||||||
WBInteraction000457922 | |||||||||
WBInteraction000551615 | |||||||||
WBInteraction000553193 | |||||||||
WBInteraction000576469 | |||||||||
WBInteraction000580685 | |||||||||
Map_info | Positive | Positive_clone | F54D1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 4.94246 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00061750 | |||||||||
Method | Gene |