WormBase Tree Display for Gene: WBGene00011372
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| WBGene00011372 | SMap | S_parent | Sequence | C06A12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | npr-26 | Person_evidence | WBPerson260 | |||||
| WBPerson42 | |||||||||
| Sequence_name | T02D1.6 | ||||||||
| Molecular_name | T02D1.6a | ||||||||
| T02D1.6a.1 | |||||||||
| CE50255 | |||||||||
| T02D1.6b | |||||||||
| CE50599 | |||||||||
| T02D1.6c | |||||||||
| CE50628 | |||||||||
| T02D1.6b.1 | |||||||||
| T02D1.6c.1 | |||||||||
| Other_name | CELE_T02D1.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | npr-26 | ||||||||
| DB_info | Database | AceView | gene | 4S352 | |||||
| WormQTL | gene | WBGene00011372 | |||||||
| NDB | locus_tag | CELE_T02D1.6 | |||||||
| Panther | gene | CAEEL|EnsemblGenome=WBGene00011372|UniProtKB=A0A0K3AXD3 | |||||||
| family | PTHR24229 | ||||||||
| NCBI | gene | 24104836 | |||||||
| RefSeq | protein | NM_001380572.1 | |||||||
| NM_001313029.4 | |||||||||
| NM_001313028.3 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AS23 | |||||||
| A0A0K3AXD3 | |||||||||
| A0A0K3AUF0 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3AXD3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 12 Apr 2012 16:15:43 | WBPerson2970 | Name_change | CGC_name | npr-26 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npr | ||||||||
| Allele (295) | |||||||||
| Strain | WBStrain00049455 | ||||||||
| WBStrain00051541 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00006864 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00008065 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00020086 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013848 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018886 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011381 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00015559 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00013782 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018344 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018089 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity and peptide binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in neuron projection. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T02D1.6a | |||||||
| T02D1.6b | |||||||||
| T02D1.6c | |||||||||
| Corresponding_CDS_history | T02D1.6:wp78 | ||||||||
| T02D1.6:wp245 | |||||||||
| Corresponding_transcript | T02D1.6a.1 | ||||||||
| T02D1.6b.1 | |||||||||
| T02D1.6c.1 | |||||||||
| Other_sequence | FC550586.1 | ||||||||
| Acan_isotig09134 | |||||||||
| BXC05676_1 | |||||||||
| ACC39586_1 | |||||||||
| BXC03205_1 | |||||||||
| JI173505.1 | |||||||||
| Oden_isotig21277 | |||||||||
| Associated_feature | WBsf652424 | ||||||||
| WBsf999037 | |||||||||
| WBsf999038 | |||||||||
| WBsf1018986 | |||||||||
| WBsf231296 | |||||||||
| WBsf231297 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018024 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010258 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052206 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024296 | ||||||||
| Expr1155836 | |||||||||
| Expr2014412 | |||||||||
| Expr2032653 | |||||||||
| Drives_construct | WBCnstr00030705 | ||||||||
| Construct_product | WBCnstr00030705 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (131) | |||||||||
| Map_info | Map | IV | Position | 16.8696 | |||||
| Positive | Positive_clone | T02D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00047901 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [140923 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. | |||||||||
| Method | Gene |
