WormBase Tree Display for Gene: WBGene00013555

WBGene00013555 SMap: S_parent: Sequence: Y75B8A
  Identity: Version: 2
    Name: CGC_name: fbxa-89 Person_evidence: WBPerson655
      Sequence_name: Y75B8A.21
      Molecular_name: Y75B8A.21
        Y75B8A.21.1
        CE44407
      Other_name: CELE_Y75B8A.21 Accession_evidence: NDB BX284603
      Public_name: fbxa-89
    DB_info: Database: AceView gene 3N327
        WormQTL gene WBGene00013555
        WormFlux gene WBGene00013555
        NDB locus_tag CELE_Y75B8A.21
        Panther gene CAEEL|WormBase=WBGene00013555|UniProtKB=Q9XW66
          family PTHR23015
        NCBI gene 190708
        RefSeq protein NM_067192.4
        TREEFAM TREEFAM_ID TF322479
        TrEMBL UniProtAcc Q9XW66
        UniProt_GCRP UniProtAcc Q9XW66
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-89
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (96)
    RNASeq_FPKM (74)
    Ortholog (27)
    Paralog (223)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in AVDL; AVDR; and rectal gland cell based on single-cell RNA-seq studies. Is affected by several genes including pmk-1; npr-1; and pgl-1 based on tiling array; RNA-seq; and microarray studies. Is affected by ten chemicals including multi-walled carbon nanotube; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y75B8A.21
    Corresponding_CDS_history: Y75B8A.21:wp210
    Corresponding_transcript: Y75B8A.21.1
    Associated_feature: WBsf645653
      WBsf994603
      WBsf1016164
  Experimental_info: RNAi_result: WBRNAi00006860 Inferred_automatically: RNAi_primary
      WBRNAi00021443 Inferred_automatically: RNAi_primary
      WBRNAi00058450 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011579
      Expr1161867
      Expr2011585
      Expr2029824
    Microarray_results: SMD_Y75B8A.21
      185374_at
      GPL19516_CGZ0054765
      GPL21109_Y75B8A.21
      GPL3518_CE23032
      GPL8673_Y75B8A_21P00025
      GPL8673_Y75B8A_21P00259
      GPL8673_Y75B8A_21P00692
    Expression_cluster (72)
    Interaction: WBInteraction000257953
      WBInteraction000457507
  Map_info: Map: III Position: 16.1817 Error: 0.007454
    Positive: Positive_clone: Y75B8A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene