WormBase Tree Display for Gene: WBGene00013688
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| WBGene00013688 | SMap | S_parent | Sequence | Y105E8B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | riok-2 | Person_evidence | WBPerson2149 | |||||
| Sequence_name | Y105E8B.3 | ||||||||
| Molecular_name | Y105E8B.3 | ||||||||
| Y105E8B.3.1 | |||||||||
| CE33542 | |||||||||
| Other_name | Y105E8B.h | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y105E8B.i | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y105E8B.3 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | riok-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 30 Mar 2009 16:48:10 | WBPerson9133 | Name_change | CGC_name | riok-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | riok | ||||||||
| Allele (105) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Contained_in_operon | CEOP1744 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00014012 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00019698 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable protein kinase activity. Involved in nematode larval development. Predicted to be located in cytosol and nucleus. Predicted to be part of preribosome, small subunit precursor. Is an ortholog of human RIOK2 (RIO kinase 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y105E8B.3 | |||||||
| Corresponding_CDS_history | Y105E8B.3:wp96 | ||||||||
| Corresponding_transcript | Y105E8B.3.1 | ||||||||
| Other_sequence (45) | |||||||||
| Associated_feature | WBsf034266 | ||||||||
| WBsf986204 | |||||||||
| WBsf1011278 | |||||||||
| WBsf218805 | |||||||||
| WBsf218806 | |||||||||
| WBsf218807 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055238 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00114549 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114526 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025796 | ||||||||
| Expr1036117 | |||||||||
| Expr1158778 | |||||||||
| Expr2015362 | |||||||||
| Expr2033596 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction (58) | |||||||||
| Map_info | Map | I | Position | 26.0178 | Error | 0.029116 | |||
| Positive | Positive_clone | Y105E8B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027258 | ||||||||
| WBPaper00038076 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00045510 | |||||||||
| WBPaper00046459 | |||||||||
| WBPaper00049703 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
