WormBase Tree Display for Gene: WBGene00014000
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WBGene00014000 | SMap | S_parent | Sequence | CHROMOSOME_IV | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (104) | ||||||
Strain | WBStrain00035297 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation (11) | ||||||
Ortholog (33) | ||||||
Paralog | WBGene00013999 | Caenorhabditis elegans | From_analysis | Panther | ||
WormBase-Compara | ||||||
WBGene00044362 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
Structured_description | Concise_description | The ZK550.6 gene encodes an ortholog of the human gene PHYTANOYL-COA HYDROXYLASE (PHYH; PAHX; OMIM:602026), which when mutated leads to Refsum disease (OMIM:266500). | Paper_evidence | WBPaper00004637 | ||
Curator_confirmed | WBPerson1823 | |||||
WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Predicted to enable phytanoyl-CoA dioxygenase activity. Predicted to be involved in fatty acid alpha-oxidation. Expressed in intestine. Human ortholog(s) of this gene implicated in Refsum disease; Zellweger syndrome; and orofacial cleft. Is an ortholog of human PHYH (phytanoyl-CoA 2-hydroxylase). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:905 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | |
DOID:0050567 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | |||
DOID:906 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | |||
DOID:10582 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | |||
Molecular_info | Corresponding_CDS | ZK550.6 | ||||
Corresponding_transcript | ZK550.6.1 | |||||
Other_sequence (54) | ||||||
Experimental_info | RNAi_result | WBRNAi00022060 | Inferred_automatically | RNAi_primary | ||
WBRNAi00102264 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00059516 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00038339 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Chronogram101 | |||||
Expr7763 | ||||||
Expr1010877 | ||||||
Expr1036257 | ||||||
Expr1162933 | ||||||
Expr2008876 | ||||||
Expr2027109 | ||||||
Drives_construct | WBCnstr00001107 | |||||
WBCnstr00012908 | ||||||
Microarray_results (19) | ||||||
Expression_cluster (247) | ||||||
Interaction (38) | ||||||
Map_info | Positive | Positive_clone | ZK550 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | IV | 16.2854 | ||||
Reference | WBPaper00004460 | |||||
WBPaper00038491 | ||||||
WBPaper00055090 | ||||||
Method | Gene |