WormBase Tree Display for Gene: WBGene00013999
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| WBGene00013999 | SMap | S_parent | Sequence | ZK550 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | phyh-1 | Person_evidence | WBPerson13844 | |||||
| WBPerson7188 | |||||||||
| Sequence_name | ZK550.5 | ||||||||
| Molecular_name | ZK550.5 | ||||||||
| ZK550.5.1 | |||||||||
| CE16736 | |||||||||
| Other_name | CELE_ZK550.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | phyh-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Nov 2021 16:42:28 | WBPerson1983 | Name_change | CGC_name | phyh-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | phyh | ||||||||
| Allele (88) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00038025 | ||||||||
| 00038026 | |||||||||
| 00038027 | |||||||||
| 00120729 | |||||||||
| 00120730 | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00014000 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00044362 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable phytanoyl-CoA dioxygenase activity. Predicted to be involved in fatty acid alpha-oxidation. Expressed in nerve ring. Human ortholog(s) of this gene implicated in Refsum disease; Zellweger syndrome; and orofacial cleft. Is an ortholog of human PHYH (phytanoyl-CoA 2-hydroxylase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:905 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | ||||
| DOID:0050567 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | ||||||
| DOID:906 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | ||||||
| DOID:10582 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | ||||||
| Molecular_info | Corresponding_CDS | ZK550.5 | |||||||
| Corresponding_transcript | ZK550.5.1 | ||||||||
| Other_sequence | CJC11082_1 | ||||||||
| Associated_feature | WBsf999011 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00038338 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022059 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059515 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103089 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7762 | ||||||||
| Expr1028901 | |||||||||
| Expr1162932 | |||||||||
| Expr2008875 | |||||||||
| Expr2027108 | |||||||||
| Drives_construct | WBCnstr00012907 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (200) | |||||||||
| Interaction (205) | |||||||||
| Map_info | Positive | Positive_clone | ZK550 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 16.2849 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
