WormBase Tree Display for Gene: WBGene00016468
expand all nodes | collapse all nodes | view schema
| WBGene00016468 | SMap | S_parent | Sequence | C36B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C36B7.5 | |||||||
| Molecular_name | C36B7.5a | ||||||||
| C36B7.5a.1 | |||||||||
| CE53489 | |||||||||
| C36B7.5b | |||||||||
| CE53156 | |||||||||
| C36B7.5b.1 | |||||||||
| Other_name | CELE_C36B7.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C36B7.5 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (284) | |||||||||
| Strain | WBStrain00032430 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00000082 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00003252 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011880 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00020567 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00017471 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017376 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in ADEshL; ADEshR; and sensory neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; microarray; and RNA-seq studies. Is affected by thirteen chemicals including 1-methylnicotinamide; D-glucose; and stavudine based on RNA-seq and microarray studies. Human ortholog(s) of this gene implicated in X-linked properdin deficiency and factor VIII deficiency. Is predicted to encode a protein with the following domains: Thrombospondin type-1 (TSP1) repeat; Thrombospondin type-1 (TSP1) repeat superfamily; and Thrombospondin type 1 domain. Is an ortholog of human CFP (complement factor properdin). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111768 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8864) | ||||
| DOID:12134 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8864) | ||||||
| Molecular_info | Corresponding_CDS | C36B7.5a | |||||||
| C36B7.5b | |||||||||
| Corresponding_CDS_history | C36B7.5a:wp271 | ||||||||
| C36B7.5b:wp271 | |||||||||
| Corresponding_transcript | C36B7.5a.1 | ||||||||
| C36B7.5b.1 | |||||||||
| Other_sequence | HBC24641_1 | ||||||||
| AE04003 | |||||||||
| JI165394.1 | |||||||||
| AYC02258_1 | |||||||||
| ES409745.1 | |||||||||
| Associated_feature | WBsf654105 | ||||||||
| WBsf654106 | |||||||||
| WBsf670682 | |||||||||
| WBsf1005725 | |||||||||
| WBsf1005726 | |||||||||
| WBsf1005727 | |||||||||
| WBsf1023187 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011683 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042046 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020498 | ||||||||
| Expr1037064 | |||||||||
| Expr1146046 | |||||||||
| Expr2001472 | |||||||||
| Expr2019695 | |||||||||
| Drives_construct | WBCnstr00028043 | ||||||||
| Construct_product | WBCnstr00028043 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (133) | |||||||||
| Interaction | WBInteraction000354454 | ||||||||
| WBInteraction000391641 | |||||||||
| Map_info | Positive | Positive_clone | C36B7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -1.87044 | |||||||
| Reference | WBPaper00055090 | ||||||||
| WBPaper00064898 | |||||||||
| Method | Gene |
