WormBase Tree Display for Gene: WBGene00003252
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| WBGene00003252 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F01F1 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | mig-21 | Person_evidence | WBPerson342 | |||||
| Sequence_name | F01F1.13 | ||||||||
| Molecular_name | F01F1.13 | ||||||||
| F01F1.13.1 | |||||||||
| CE48870 | |||||||||
| Other_name | CELE_F01F1.13 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | mig-21 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00003252 | |||||
| NDB | locus_tag | CELE_F01F1.13 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003252|UniProtKB=G1FC92 | |||||||
| family | PTHR22906 | ||||||||
| NCBI | gene | 184064 | |||||||
| RefSeq | protein | NM_001268004.4 | |||||||
| SwissProt | UniProtAcc | G1FC92 | |||||||
| TREEFAM | TREEFAM_ID | TF317672 | |||||||
| UniProt_GCRP | UniProtAcc | G1FC92 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 25 Nov 2011 11:28:00 | WBPerson2970 | Event | Acquires_merge | WBGene00017167 | ||||
| Name_change | Sequence_name | F01F1.13 | |||||||
| Acquires_merge | WBGene00017167 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mig | ||||||||
| Allele (20) | |||||||||
| Legacy_information | [Du H, Chalfie M ] u787 homozygotes exhibit abnormalities in migration of touch cells AVM and PVM, resulting from random initial migrations of QL and QR. | ||||||||
| Strain | WBStrain00035048 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (16) | |||||||||
| Paralog | WBGene00017379 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00017376 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008851 | |||||||||
| WBGene00011880 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017471 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00016468 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | mig-21 encodes a thrombospondin repeat-containing single-pass transmembrane protein; MIG-21 functions cell autonomously in the Q neuroblasts, and in parallel with UNC-40/DCC, to regulate the initial polarization and asymmetric migration of the Q neuroblasts and thus determine the threshold for EGL-20-mediated Wnt signaling that, in turn, regulates expression of mab-5 and the extent of posteriorly directed cell migration; mig-21 is transiently expressed in QL and QR during the L1 larval stage when the initial polarization and migration of the Q neuroblasts occurs and in body wall muscle throughout post-embryonic development. | Paper_evidence | WBPaper00004685 | |||||
| WBPaper00040419 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 30 Nov 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable signaling receptor activity. Involved in several processes, including cell migration; determination of left/right asymmetry in nervous system; and regulation of canonical Wnt signaling pathway. Predicted to be located in plasma membrane. Expressed in QL; QR; and body wall musculature. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F01F1.13 | |||||||
| Corresponding_CDS_history | F01F1.13a:wp239 | ||||||||
| F01F1.13b:wp275 | |||||||||
| Corresponding_transcript | F01F1.13.1 | ||||||||
| Associated_feature | WBsf666936 | ||||||||
| WBsf666937 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00101964 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030538 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043745 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005368 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012737 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9684 | ||||||||
| Expr1147729 | |||||||||
| Expr2013567 | |||||||||
| Expr2031800 | |||||||||
| Drives_construct | WBCnstr00015461 | ||||||||
| Construct_product | WBCnstr00015461 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (78) | |||||||||
| Interaction | WBInteraction000524010 | ||||||||
| WBInteraction000524011 | |||||||||
| WBInteraction000554866 | |||||||||
| Anatomy_function | WBbtf0822 | ||||||||
| WBbtf0828 | |||||||||
| Map_info | Map | III | Position | -1.43748 | |||||
| Positive | Positive_clone | F01F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4017 | |||||||
| Reference (14) | |||||||||
| Remark | Data extracted from Du and Chalfie (2001) | ||||||||
| Positive_clone is based on mutant sequence [030403 ck1] | |||||||||
| Method | Gene |
