WormBase Tree Display for Gene: WBGene00016580

WBGene00016580 SMap: S_parent: Sequence: C42C1
  Identity: Version: 2
    Name: CGC_name: ppm-1.H Laboratory_evidence: GNW
      Sequence_name: C42C1.2
      Molecular_name: C42C1.2
        C42C1.2.1
        CE42705
      Other_name: CELE_C42C1.2 Accession_evidence: NDB BX284604
      Public_name: ppm-1.H
    DB_info: Database: AceView gene 4N30
        WormQTL gene WBGene00016580
        WormFlux gene WBGene00016580
        NDB locus_tag CELE_C42C1.2
        Panther gene CAEEL|WormBase=WBGene00016580|UniProtKB=A3QMB1
          family PTHR13832
        NCBI gene 183398
        RefSeq protein NM_069928.6
        TREEFAM TREEFAM_ID TF314700
        TrEMBL UniProtAcc A3QMB1
        UniProt_GCRP UniProtAcc A3QMB1
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 24 May 2018 17:10:07 WBPerson1983 Name_change: CGC_name: ppm-1.H
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ppm
    Allele (55)
    RNASeq_FPKM (74)
    GO_annotation: 00004355
      00004356
      00004357
      00004358
      00004359
      00122156
      00122157
    Ortholog (41)
    Paralog: WBGene00001412 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00006460 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009354 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00011953 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018362 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022832 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021856 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00006524 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable [pyruvate dehydrogenase (lipoamide)] phosphatase activity. Predicted to be located in mitochondrion. Is an ortholog of human PPM1J (protein phosphatase, Mg2+/Mn2+ dependent 1J). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C42C1.2
    Corresponding_CDS_history: C42C1.2:wp114
      C42C1.2:wp191
    Corresponding_transcript: C42C1.2.1
    Other_sequence (13)
    Associated_feature: WBsf652285
      WBsf668408
      WBsf668409
      WBsf668410
      WBsf998067
      WBsf230989
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr1016068
      Expr1037113
      Expr1146329
      Expr2001582
      Expr2019806
    Drives_construct: WBCnstr00027966
    Construct_product: WBCnstr00027966
    Microarray_results (19)
    Expression_cluster (119)
    Interaction: WBInteraction000418297
      WBInteraction000422183
  Map_info: Map: IV Position: 5.82793
    Positive: Positive_clone: C42C1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene