WormBase Tree Display for Gene: WBGene00017808
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| WBGene00017808 | SMap | S_parent | Sequence | F26A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nspd-9 | Person_evidence | WBPerson1983 | |||||
| Sequence_name | F26A1.10 | ||||||||
| Molecular_name | F26A1.10 | ||||||||
| F26A1.10.1 | |||||||||
| CE02678 | |||||||||
| Other_name | CELE_F26A1.10 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | nspd-9 | ||||||||
| DB_info | Database | AceView | gene | 3F920 | |||||
| WormQTL | gene | WBGene00017808 | |||||||
| WormFlux | gene | WBGene00017808 | |||||||
| NDB | locus_tag | CELE_F26A1.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017808|UniProtKB=Q19799 | |||||||
| family | PTHR35375 | ||||||||
| NCBI | gene | 175640 | |||||||
| RefSeq | protein | NM_065599.5 | |||||||
| TREEFAM | TREEFAM_ID | TF319437 | |||||||
| TrEMBL | UniProtAcc | Q19799 | |||||||
| UniProt_GCRP | UniProtAcc | Q19799 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 Oct 2006 09:54:22 | WBPerson2970 | Name_change | CGC_name | nspd-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nspd | ||||||||
| Allele | WBVar02151824 | ||||||||
| WBVar02148264 | |||||||||
| WBVar02144703 | |||||||||
| WBVar01667445 | |||||||||
| WBVar01498524 | |||||||||
| WBVar00824129 | |||||||||
| WBVar00824130 | |||||||||
| WBVar01644316 | |||||||||
| Strain | WBStrain00002127 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (87) | |||||||||
| Paralog | WBGene00010633 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012781 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016058 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00017386 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00043147 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020860 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021280 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020715 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022754 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Expressed in head. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F26A1.10 | |||||||
| Corresponding_transcript | F26A1.10.1 | ||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf651007 | ||||||||
| WBsf226583 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045570 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005849 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013902 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031413 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram926 | ||||||||
| Expr5867 | |||||||||
| Expr1027381 | |||||||||
| Expr1149483 | |||||||||
| Expr2014486 | |||||||||
| Expr2032725 | |||||||||
| Drives_construct | WBCnstr00002893 | ||||||||
| WBCnstr00027001 | |||||||||
| Construct_product | WBCnstr00027001 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (166) | |||||||||
| Interaction (42) | |||||||||
| Map_info | Map | III | Position | -2.44717 | |||||
| Positive | Positive_clone | F26A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
