WormBase Tree Display for Gene: WBGene00018258
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| WBGene00018258 | SMap | S_parent | Sequence | F41B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F41B4.2 | |||||||
| Molecular_name | F41B4.2a | ||||||||
| F41B4.2a.1 | |||||||||
| CE30981 | |||||||||
| F41B4.2b | |||||||||
| CE07212 | |||||||||
| F41B4.2b.1 | |||||||||
| Other_name | CELE_F41B4.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F41B4.2 | ||||||||
| DB_info | Database | AceView | gene | XH450 | |||||
| WormQTL | gene | WBGene00018258 | |||||||
| WormFlux | gene | WBGene00018258 | |||||||
| NDB | locus_tag | CELE_F41B4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018258|UniProtKB=H2KZE6 | |||||||
| family | PTHR31712 | ||||||||
| NCBI | gene | 180953 | |||||||
| RefSeq | protein | NM_001029474.3 | |||||||
| NM_001029475.8 | |||||||||
| TREEFAM | TREEFAM_ID | TF321463 | |||||||
| TrEMBL | UniProtAcc | H2KZE6 | |||||||
| Q7Z297 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZE6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (77) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00009087 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010262 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010404 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015322 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015325 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell; neurons; and ventral nerve cord based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including rotenone; D-glucose; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF5354 and Family of unknown function (DUF5354). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F41B4.2a | |||||||
| F41B4.2b | |||||||||
| Corresponding_transcript | F41B4.2a.1 | ||||||||
| F41B4.2b.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046939 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00008775 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028420 | ||||||||
| Expr1150806 | |||||||||
| Expr2003570 | |||||||||
| Expr2021787 | |||||||||
| Drives_construct | WBCnstr00026659 | ||||||||
| Construct_product | WBCnstr00026659 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (164) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Positive | Positive_clone | F41B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -2.35219 | |||||||
| Method | Gene |
