WormBase Tree Display for Gene: WBGene00018976
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| WBGene00018976 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | daam-1 | Person_evidence | WBPerson103 | |||||
| WBPerson2835 | |||||||||
| WBPerson3809 | |||||||||
| WBPerson399 | |||||||||
| Sequence_name | F56E10.2 | ||||||||
| Molecular_name | F56E10.2a | ||||||||
| F56E10.2a.1 | |||||||||
| CE45074 | |||||||||
| F56E10.2b | |||||||||
| CE50550 | |||||||||
| F56E10.2c | |||||||||
| CE50572 | |||||||||
| F56E10.2a.2 | |||||||||
| F56E10.2b.1 | |||||||||
| F56E10.2c.1 | |||||||||
| Other_name | fhod-2 | Person_evidence | WBPerson103 | ||||||
| WBPerson2835 | |||||||||
| Y38C9B.a | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F56E10.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | daam-1 | ||||||||
| DB_info | Database | AceView | gene | 5A542 | |||||
| WormQTL | gene | WBGene00018976 | |||||||
| WormFlux | gene | WBGene00018976 | |||||||
| NDB | locus_tag | CELE_F56E10.2 | |||||||
| Panther | gene | CAEEL|EnsemblGenome=WBGene00018976|UniProtKB=D6VPA1 | |||||||
| family | PTHR45725 | ||||||||
| NCBI | gene | 186392 | |||||||
| RefSeq | protein | NM_001313191.3 | |||||||
| NM_001313190.3 | |||||||||
| NM_070731.6 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3ASL6 | |||||||
| A0A0K3AXY1 | |||||||||
| D6VPA1 | |||||||||
| UniProt_GCRP | UniProtAcc | D6VPA1 | |||||||
| OMIM | gene | 606627 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Jul 2005 16:48:30 | WBPerson2970 | Name_change | CGC_name | fhod-2 | ||||
| 3 | 30 Apr 2010 11:14:55 | WBPerson2970 | Name_change | CGC_name | daam-1 | ||||
| Other_name | fhod-2 | ||||||||
| 4 | 21 May 2010 17:14:23 | WBPerson1849 | Event | Acquires_merge | WBGene00018977 | ||||
| Acquires_merge | WBGene00018977 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | daam | ||||||||
| Allele (416) | |||||||||
| Possibly_affected_by | WBVar02156989 | ||||||||
| Strain | WBStrain00002857 | ||||||||
| WBStrain00054731 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00007754 | ||||||||
| 00123933 | |||||||||
| 00123934 | |||||||||
| 00123935 | |||||||||
| 00123936 | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00000872 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00008848 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016735 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019030 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021473 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021698 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | daam-1 encodes an ortholog of Drosophila DAAM and human DAAM1 (OMIM:606626); DAAM-1 enables Wnt-directed planar cell polarity; DAAM-1 is required for the fully asymmetrical division of B.a versus B.p cells, though this requirement is quantitatively weak. | Paper_evidence | WBPaper00027345 | |||||
| WBPaper00028595 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 25 May 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable actin binding activity and small GTPase binding activity. Predicted to be involved in positive regulation of actin filament polymerization. Human ortholog(s) of this gene implicated in familial nephrotic syndrome. Is an ortholog of human DAAM2 (dishevelled associated activator of morphogenesis 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:2590 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18143) | ||||
| Molecular_info | Corresponding_CDS | F56E10.2a | |||||||
| F56E10.2b | |||||||||
| F56E10.2c | |||||||||
| Corresponding_CDS_history | F56E10.2:wp88 | ||||||||
| F56E10.2:wp215 | |||||||||
| Corresponding_transcript | F56E10.2a.1 | ||||||||
| F56E10.2a.2 | |||||||||
| F56E10.2b.1 | |||||||||
| F56E10.2c.1 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature (22) | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Chronogram1731 | ||||||||
| Expr6223 | |||||||||
| Expr1023335 | |||||||||
| Expr1038192 | |||||||||
| Expr1152481 | |||||||||
| Expr2010755 | |||||||||
| Expr2028992 | |||||||||
| Drives_construct | WBCnstr00003379 | ||||||||
| WBCnstr00037829 | |||||||||
| Construct_product | WBCnstr00037829 | ||||||||
| Microarray_results (33) | |||||||||
| Expression_cluster (163) | |||||||||
| Interaction | WBInteraction000030323 | ||||||||
| WBInteraction000160866 | |||||||||
| WBInteraction000160867 | |||||||||
| WBInteraction000167858 | |||||||||
| WBInteraction000319736 | |||||||||
| Map_info | Map | V | Position | -20.0139 | Error | 0.000694 | |||
| Positive | Positive_clone | F56E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5580 | |||||||
| 5487 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027345 | ||||||||
| WBPaper00033015 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041258 | |||||||||
| WBPaper00042764 | |||||||||
| WBPaper00046877 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060525 | |||||||||
| WBPaper00061553 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
