WormBase Tree Display for Gene: WBGene00019975
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| WBGene00019975 | SMap | S_parent | Sequence | R09A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | flp-34 | Person_evidence | WBPerson369 | |||||
| WBPerson11490 | |||||||||
| Sequence_name | R09A1.5 | ||||||||
| Molecular_name | R09A1.5a | ||||||||
| R09A1.5a.1 | |||||||||
| CE29447 | |||||||||
| R09A1.5b | |||||||||
| CE50831 | |||||||||
| R09A1.5b.1 | |||||||||
| R09A1.5c | |||||||||
| Other_name | npfp-1 | Person_evidence | WBPerson11490 | ||||||
| CELE_R09A1.5 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | flp-34 | ||||||||
| DB_info | Database | AceView | gene | 5B508C | |||||
| 5B508 | |||||||||
| WormQTL | gene | WBGene00019975 | |||||||
| WormFlux | gene | WBGene00019975 | |||||||
| NDB | locus_tag | CELE_R09A1.5 | |||||||
| NCBI | gene | 178606 | |||||||
| RefSeq | protein | NM_070964.6 | |||||||
| NR_132496.1 | |||||||||
| NM_001383273.2 | |||||||||
| TrEMBL | UniProtAcc | Q95X32 | |||||||
| A0A0K3AST3 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3AST3 | |||||||
| RNAcentral | URSid | URS000084A63C | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Sep 2013 16:33:38 | WBPerson2970 | Name_change | CGC_name | flp-34 | ||||
| 3 | 13 Oct 2023 01:37:05 | WBPerson51134 | Name_change | CGC_name | flp-34 | ||||
| Other_name | npfp-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | flp | ||||||||
| Allele (130) | |||||||||
| Possibly_affected_by | WBVar02152918 | ||||||||
| Strain | WBStrain00001766 | ||||||||
| WBStrain00032948 | |||||||||
| WBStrain00047162 | |||||||||
| WBStrain00055097 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Expressed in neurons and vulva. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R09A1.5a | |||||||
| R09A1.5b | |||||||||
| Corresponding_transcript | R09A1.5c | ||||||||
| R09A1.5a.1 | |||||||||
| R09A1.5b.1 | |||||||||
| Other_sequence | CBC13278_1 | ||||||||
| SRC07348_1 | |||||||||
| FC811988.1 | |||||||||
| Associated_feature | WBsf652461 | ||||||||
| WBsf999240 | |||||||||
| WBsf999241 | |||||||||
| WBsf999242 | |||||||||
| WBsf1019125 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051581 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr6487 | ||||||||
| Expr15171 | |||||||||
| Expr1021002 | |||||||||
| Expr1155253 | |||||||||
| Expr2011844 | |||||||||
| Expr2030082 | |||||||||
| Drives_construct | WBCnstr00002580 | ||||||||
| WBCnstr00042025 | |||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction | WBInteraction000564540 | ||||||||
| WBInteraction000564541 | |||||||||
| WBInteraction000564542 | |||||||||
| WBInteraction000564543 | |||||||||
| WBInteraction000564544 | |||||||||
| WBInteraction000569185 | |||||||||
| WBInteraction000579035 | |||||||||
| WBInteraction000579036 | |||||||||
| Map_info | Map | V | Position | -19.8666 | |||||
| Positive | Positive_clone | R09A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00053388 | ||||||||
| WBPaper00055865 | |||||||||
| WBPaper00059878 | |||||||||
| WBPaper00061409 | |||||||||
| WBPaper00063588 | |||||||||
| WBPaper00064746 | |||||||||
| WBPaper00065946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
