WormBase Tree Display for Gene: WBGene00020187
expand all nodes | collapse all nodes | view schema
WBGene00020187 | SMap | S_parent | Sequence | T03F1 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gsp | ||||||
Allele (23) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (28) | |||||||
Contained_in_operon | CEOP1956 | ||||||
Ortholog (58) | |||||||
Paralog (45) | |||||||
Structured_description | Concise_description | gsp-4 encodes an ortholog of protein phosphatase 1 gamma, a Glc7/PP1 phosphatase (HGNC:PPP1CA); GSP-4 is nearly identical to GSP-3, and the two proteins appear to function redundantly during sperm development; GSP-3/4 activity is required for chromosome partitioning during sperm meiosis and for sperm motility, specifically for pseudopod development and a normal rate of pseudopodial treadmilling; in regulating sperm development, GSP-3/4 functions upstream of, and regulates the localization of, the major sperm proteins (MSPs); GSP-3/4 may also play a role in egg laying; GSP-3/4 is expresed at high levels in sperm, with strong localization seen around meiotic and mature sperm DNA. | Paper_evidence | WBPaper00028451 | |||
WBPaper00040337 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson324 | |||||||
Date_last_updated | 10 Nov 2014 00:00:00 | ||||||
Automated_description | Predicted to enable protein serine/threonine phosphatase activity. Involved in regulation of pseudopodium assembly and reproductive process. Located in cytoplasm and pseudopodium. Part of chromatin. Expressed in ILsoDL; ILsoVL; anal sphincter muscle; intestine; and sperm. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T03F1.5 | |||||
Corresponding_transcript | T03F1.5.1 | ||||||
T03F1.5.2 | |||||||
T03F1.5.3 | |||||||
Other_sequence (48) | |||||||
Associated_feature | WBsf983256 | ||||||
WBsf219185 | |||||||
WBsf219186 | |||||||
WBsf219187 | |||||||
Experimental_info | RNAi_result | WBRNAi00052284 | Inferred_automatically | RNAi_primary | |||
WBRNAi00087523 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087521 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087522 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004120 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00055022 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087520 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087524 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004450 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr2570 | ||||||
Expr4209 | |||||||
Expr9883 | |||||||
Expr13145 | |||||||
Expr1027145 | |||||||
Expr1155915 | |||||||
Expr2012289 | |||||||
Expr2030525 | |||||||
Drives_construct | WBCnstr00010857 | ||||||
WBCnstr00025315 | |||||||
Construct_product | WBCnstr00010857 | ||||||
WBCnstr00025315 | |||||||
Antibody | WBAntibody00001141 | ||||||
WBAntibody00001142 | |||||||
WBAntibody00001143 | |||||||
WBAntibody00001144 | |||||||
WBAntibody00002730 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (220) | |||||||
Interaction (222) | |||||||
Map_info | Map | I | Position | -1.99964 | Error | 0.003425 | |
Positive | Positive_clone | T03F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (24) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |