WormBase Tree Display for Gene: WBGene00020481
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| WBGene00020481 | SMap | S_parent | Sequence | T13C2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gldi-2 | Person_evidence | WBPerson6609 | |||||
| WBPerson1816 | |||||||||
| Sequence_name | T13C2.6 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_T13C2.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | gldi-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 May 2023 12:43:53 | WBPerson51134 | Name_change | CGC_name | gldi-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gldi | ||||||||
| Allele (42) | |||||||||
| Strain | WBStrain00055214 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022613 | ||||||||
| 00022614 | |||||||||
| 00022615 | |||||||||
| 00125113 | |||||||||
| Ortholog (51) | |||||||||
| Paralog | WBGene00008779 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00003071 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00003072 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00003738 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00004374 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008609 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015083 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019756 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019811 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be involved in endocytosis. Predicted to be located in plasma membrane. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; artery disease (multiple); autistic disorder; and cerebellar ataxia, mental retardation and dysequlibrium syndrome. Is an ortholog of human LDLR (low density lipoprotein receptor); LRP8 (LDL receptor related protein 8); and VLDLR (very low density lipoprotein receptor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (12) | ||||||||
| Molecular_info | Corresponding_CDS | T13C2.6a | |||||||
| T13C2.6b | |||||||||
| T13C2.6c | |||||||||
| T13C2.6d | |||||||||
| Corresponding_CDS_history | T13C2.6a:wp121 | ||||||||
| T13C2.6b:wp121 | |||||||||
| Corresponding_transcript | T13C2.6a.1 | ||||||||
| T13C2.6b.1 | |||||||||
| T13C2.6c.1 | |||||||||
| T13C2.6d.1 | |||||||||
| Other_sequence (47) | |||||||||
| Associated_feature | WBsf657714 | ||||||||
| WBsf657715 | |||||||||
| WBsf988248 | |||||||||
| WBsf1012423 | |||||||||
| WBsf221509 | |||||||||
| WBsf221510 | |||||||||
| WBsf221511 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053257 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018668 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010844 | ||||||||
| Expr1038930 | |||||||||
| Expr1156839 | |||||||||
| Expr2006146 | |||||||||
| Expr2024361 | |||||||||
| Drives_construct | WBCnstr00025109 | ||||||||
| Construct_product | WBCnstr00025109 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction | WBInteraction000540409 | ||||||||
| WBInteraction000549323 | |||||||||
| WBInteraction000567718 | |||||||||
| WBInteraction000570396 | |||||||||
| WBInteraction000579405 | |||||||||
| WBInteraction000583497 | |||||||||
| Map_info | Map | II | Position | 0.107754 | |||||
| Positive | Positive_clone | T13C2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027373 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
