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WormBase Tree Display for Gene: WBGene00029792

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Name Class

WBGene00029792SMapS_parentSequencecb25.fpc1402a
IdentityVersion2
NameCGC_nameCbr-cpt-1From_analysisInferred_from_orthology
Sequence_nameCBG07886
Molecular_nameCBG07886
CBG07886.1
CBP44712
Other_nameCBG_07886Accession_evidenceNDBHE600965
Public_nameCbr-cpt-1
DB_infoDatabaseNDBlocus_tagCBG_07886
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-cpt-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcpt
RNASeq_FPKMWBls:000000265.7707From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
80.0361From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
80.2911From_analysisRNASeq.briggsae.WBls:0000002.control_mean
95.0664From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
64.3226From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
72.9034From_analysisRNASeq.briggsae.WBls:0000002.control_median
76.299From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003147.39From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
187.978From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
228.566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
183.719From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
186.558From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004144.092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
145.436From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
146.781From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
148.868From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
151.29From_analysisRNASeq.briggsae.WBls:0000004.control_mean
153.316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
163.391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002711.5384From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
140.588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
35.0917From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
62.406From_analysisRNASeq.briggsae.WBls:0000027.control_mean
46.3957From_analysisRNASeq.briggsae.WBls:0000027.control_median
57.6997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
61.2295From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003559.2404From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038157.634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
21.6065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
40.5147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
70.2203From_analysisRNASeq.briggsae.WBls:0000038.control_median
79.9203From_analysisRNASeq.briggsae.WBls:0000038.control_mean
99.9259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:0000041104.599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
83.3385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
91.5014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
94.2314From_analysisRNASeq.briggsae.WBls:0000041.control_mean
94.494From_analysisRNASeq.briggsae.WBls:0000041.control_median
97.4867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
64.6171From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
85.0901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
87.7721From_analysisRNASeq.briggsae.WBls:0000041.control_mean
88.2958From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006338.3987From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
38.9916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
42.1653From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
44.0071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
44.4087From_analysisRNASeq.briggsae.WBls:0000063.control_mean
58.4808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
43.0862From_analysisRNASeq.briggsae.WBls:0000063.control_median
47.8926From_analysisRNASeq.briggsae.WBls:0000063.control_mean
65.3118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010171.2038From_analysisRNASeq.briggsae.total_over_all_stages.control_median
81.467From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
75.6199From_analysisRNASeq.briggsae.total_over_all_stages.control_median
88.1284From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133167
Ortholog (34)
ParalogWBGene00028372Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028725Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030124Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030402Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032570Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036355Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036912Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038244Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042135Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable acyltransferase activity. Is an ortholog of C. elegans cpt-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07886
Corresponding_CDS_historyCBG07886:bp194
CBG07886:bp255
Corresponding_transcriptCBG07886.1
Other_sequence (106)
Experimental_infoExpr_patternExpr1067089
Microarray_resultsGPL8303_CB6_WBGene00029792_A
GPL8303_CB6_WBGene00029792_B
GPL14143_CBG07886_897-956_0.754_38_C
GPL14143_CBG07886_1009-1068_0.763_30_A
GPL14143_CBG07886_1190-1249_0.799_4_B
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
WBPaper00059178:Cbr-htz-1(gu167)_downregulated
MethodGene