WormBase Tree Display for Gene: WBGene00031381

WBGene00031381 SMap: S_parent: Sequence: cb25.fpc2234
  Identity: Version: 5
    Name: CGC_name: Cbr-golg-4 From_analysis: Inferred_from_orthology
      Sequence_name: CBG09865
      Molecular_name: CBG09865
        CBG09865.1
        CBP43952
      Other_name: CBG_09865 Accession_evidence: NDB HE601459
      Public_name: Cbr-golg-4
    DB_info: Database: NDB locus_tag CBG_09865
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:00 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 24 Jul 2008 11:56:33 WBPerson1847 Event: Acquires_merge: WBGene00031382
        3 25 Mar 2015 16:47:29 WBPerson2970 Name_change: CGC_name: Cbr-golg-4
        4 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
        5 08 Feb 2019 15:42:26 WBPerson1983 Name_change: CGC_name: Cbr-golg-4
      Acquires_merge: WBGene00031382
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: golg
    RNASeq_FPKM: WBls:0000002 19.4965 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        27.5803 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        30.1161 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        43.2715 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        17.7307 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        23.5384 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        27.0198 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 16.4863 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        24.5447 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        32.6031 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        15.6562 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        21.5819 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 16.9519 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        17.6398 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        18.3277 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        16.9633 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        17.1063 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        18.0849 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        21.0751 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 1.70273 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        17.1222 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        43.0746 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        6.58937 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        19.4926 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        20.9407 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        32.3959 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 37.3851 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 26.1842 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        27.618 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        31.219 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        36.2539 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        3.70585 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        44.328 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 19.9073 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        24.3378 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        29.7521 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        32.3913 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        35.1664 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        50.1539 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        24.7331 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        25.5344 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        26.3357 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        30.1057 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 17.1512 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        18.8249 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        19.4041 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        19.5586 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        23.0018 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        40.07 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        19.4813 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        23.0778 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        23.4579 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 25.7391 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        26.1842 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        23.8979 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        24.7865 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (24)
    Paralog: WBGene00025953 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027382 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033905 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034001 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035775 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037531 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00039202 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00039459 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041955 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00270354 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: GRIP domain. Is an ortholog of C. elegans golg-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG09865
    Corresponding_CDS_history: CBG09865:bp194
      CBG09865:bp255
    Corresponding_transcript: CBG09865.1
    Other_sequence (21)
  Experimental_info: Expr_pattern: Expr1059447
    Microarray_results: GPL8303_CB6_WBGene00031382_A
      GPL8303_CB6_WBGene00031382_B
      GPL14143_CBG09865_347-406_0.740_195_C
      GPL14143_CBG09865_912-971_0.733_216_A
      GPL14143_CBG09865_1012-1071_0.733_214_B
  Remark: [180319 gw3] The CGC name Cbr-golg-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
  Method: Gene