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WormBase Tree Display for Gene: WBGene00035179

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Name Class

WBGene00035179SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-mig-23From_analysisInferred_from_orthology
Sequence_nameCBG14784
Molecular_nameCBG14784
CBG14784.1
CBP03461
Other_nameCBG_14784Accession_evidenceNDBHE600983
Public_nameCbr-mig-23
DB_infoDatabaseNDBlocus_tagCBG_14784
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-mig-23
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmig
RNASeq_FPKMWBls:000000210.9879From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.55979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.74235From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
8.43001From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.5858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
7.15107From_analysisRNASeq.briggsae.WBls:0000002.control_median
7.21896From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000313.336From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
15.8331From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
18.3302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
13.8528From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
15.173From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000417.6972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
18.7296From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
19.762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
16.3378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
17.3467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
17.836From_analysisRNASeq.briggsae.WBls:0000004.control_mean
18.0364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.815733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
17.3278From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.60216From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.24856From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.90624From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.489From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.21032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003512.557From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.1016From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
10.2007From_analysisRNASeq.briggsae.WBls:0000038.control_median
10.2997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
10.3906From_analysisRNASeq.briggsae.WBls:0000038.control_mean
16.7368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.42436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004110.1638From_analysisRNASeq.briggsae.WBls:0000041.control_median
10.5572From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.7435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
12.3247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
9.57659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
9.58411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
10.4267From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.3622From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
8.96936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.84336From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.32538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.33533From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
8.04717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.50892From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
10.6647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
6.64692From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.19125From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001019.58411From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.76674From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
10.2007From_analysisRNASeq.briggsae.total_over_all_stages.control_median
10.3053From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138664
Ortholog (29)
ParalogWBGene00037242Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00032648Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038656Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable hydrolase activity. Is an ortholog of C. elegans mig-23. In C. elegans, mig-23 is involved in several processes, including gonad morphogenesis; positive regulation of protein glycosylation; and ribonucleoside diphosphate catabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14784
Corresponding_CDS_historyCBG14784:bp194
CBG14784:bp205
Corresponding_transcriptCBG14784.1
Other_sequence (11)
Experimental_infoExpr_patternExpr1056280
Microarray_resultsGPL8303_CB6_WBGene00035179_A
GPL8303_CB6_WBGene00035179_B
GPL14143_CBG14784_1155-1214_0.808_9_C
GPL14143_CBG14784_1271-1330_0.720_85_A
GPL14143_CBG14784_1372-1431_0.773_38_B
MethodGene