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WormBase Tree Display for Gene: WBGene00036400

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Name Class

WBGene00036400SMapS_parentSequencecb25.fpc4044a
IdentityVersion2
NameCGC_nameCbr-inf-1From_analysisInferred_from_orthology
Sequence_nameCBG16478
Molecular_nameCBG16478
CBG16478.1
CBP03954
Other_nameCBG_16478Accession_evidenceNDBHE600949
Public_nameCbr-inf-1
DB_infoDatabaseNDBlocus_tagCBG_16478
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
219 Sep 2007 11:13:51WBPerson2970Name_changeCGC_nameCbr-inf-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classinf
RNASeq_FPKMWBls:0000002405.818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
463.325From_analysisRNASeq.briggsae.WBls:0000002.control_mean
468.241From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
515.917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
480.033From_analysisRNASeq.briggsae.WBls:0000002.control_mean
492.079From_analysisRNASeq.briggsae.WBls:0000002.control_median
530.157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003484.825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
532.535From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
580.245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
528.518From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
531.196From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004537.45From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
553.554From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
569.657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
542.014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
583.152From_analysisRNASeq.briggsae.WBls:0000004.control_mean
623.038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
643.6From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024231.729From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
282.507From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
410.695From_analysisRNASeq.briggsae.WBls:0000024.control_mean
420.788From_analysisRNASeq.briggsae.WBls:0000024.control_median
444.747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
478.923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
559.069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
56.3389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
569.476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
347.733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
61.7684From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
67.2318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
WBls:0000027166.944From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
257.78From_analysisRNASeq.briggsae.WBls:0000027.control_mean
536.526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
69.8698From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
220.579From_analysisRNASeq.briggsae.WBls:0000027.control_median
261.888From_analysisRNASeq.briggsae.WBls:0000027.control_mean
274.214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035416.188From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038278.816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
382.511From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
393.663From_analysisRNASeq.briggsae.WBls:0000038.control_median
404.814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
460.815From_analysisRNASeq.briggsae.WBls:0000038.control_mean
777.12From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041417.186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
578.219From_analysisRNASeq.briggsae.WBls:0000041.control_mean
604.853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
621.887From_analysisRNASeq.briggsae.WBls:0000041.control_median
638.921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
651.915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
320.033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
405.229From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
506.356From_analysisRNASeq.briggsae.WBls:0000041.control_mean
511.02From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000631087.74From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
611.845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
629.408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
640.7From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
694.596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
732.858From_analysisRNASeq.briggsae.WBls:0000063.control_mean
429.377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
635.054From_analysisRNASeq.briggsae.WBls:0000063.control_median
682.278From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101490.168From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
536.526From_analysisRNASeq.briggsae.total_over_all_stages.control_median
487.133From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
529.338From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00139789
00139790
Contained_in_operonCBOPA0461
OrthologWBGene00002083Caenorhabditis elegansFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00061637Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00158420Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00089797Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
CBOVI.g6046Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7889Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1517Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17291Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g321Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20018Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5946Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17528Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g133Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2991Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00417.g10560Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_03505.g18138Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_14582.g24708Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14433Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00301.g9005Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18898Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009954Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01563Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15268Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30249300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00233957Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g8032Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00120301Caenorhabditis japonicaFrom_analysisWormBase-Compara
nigoni.pc_2016.07.11_023.g28431Caenorhabditis nigoniFrom_analysisWormBase-Compara
WBGene00238693Onchocerca volvulusFrom_analysisWormBase-Compara
ParalogWBGene00023542Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024046Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026110Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026478Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026745Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026766Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026902Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027664Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029014Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029230Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030740Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030815Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030870Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031298Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031335Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031575Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032524Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032620Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033030Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033411Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033451Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033648Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033744Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034417Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034589Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034647Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035298Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036557Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039604Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040788Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00271602Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and nucleic acid binding activity. Is an ortholog of C. elegans inf-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16478
Corresponding_CDS_historyCBG16478:bp194
Corresponding_transcriptCBG16478.1
Other_sequenceOden_isotig19303
EY467855.1
GR977793.1
FE918417.1
GR977425.1
ES566650.1
ASC38606_1
Tcir_isotig12210
MAC01909_1
MA00035
FG975162.1
EX913363.1
FG977831.1
DN557892.1
FK799799.1
FG979978.1
FG353566.1
FG970769.1
HCC06493_1
BXC00180_1
FG971584.1
FK806026.1
FF681280.1
FC551428.1
FK803400.1
GO254724.1
EX561411.1
FG977829.1
ES741404.1
GR977807.1
Dviv_contig12245
FK803085.1
GR978817.1
CBC04196_1
FG349865.1
MJ00509
EX540284.1
FK809466.1
EW741886.1
FC553189.1
TV00875
GR978313.1
GR977637.1
DAC01177_1
NB07434
ES412913.1
MA00011
Dviv_isotig16680
FG979811.1
EX502582.1
PP00746
BUC01896_1
CBC00453_1
CGC00808_1
HSC00645_1
GR978936.1
EX558885.1
HGC09618_1
EX567089.1
FC540496.1
GR978045.1
GRC00037_1
NBC02036_1
Tcir_isotig19654
FG975049.1
EL890640.1
GR978619.1
HG09276
FC818656.1
EY463254.1
EX551625.1
EX555775.1
EX551802.1
FC550567.1
FC811504.1
EX007149.1
Tcir_isotig15240
ACC35825_1
Tcol_isotig11988
GP03322
FG972190.1
FF681162.1
CGC00446_1
FF680400.1
FC817440.1
GR367880.1
HBC00068_1
EY470060.1
ACC01293_1
Name_isotig04367
GO249821.1
ACC02069_1
MIC06954_1
ES412909.1
TS00408
Tcir_isotig16029
EX014451.1
FF680868.1
HG11227
Tcir_isotig32738
HC05057
EX563072.1
FC550374.1
FC817493.1
AE01999
RSC01971_1
FG588527.1
HG01059
ES563429.1
FK805554.1
MJC04507_1
FK807186.1
PVC04057_1
GR978772.1
EX012650.1
MPC00789_1
EX011990.1
FC818109.1
FF681440.1
ES566846.1
EX011264.1
GR11634
MP00776
TVC00105_1
EX560537.1
ACC23750_1
ES564630.1
GO252226.1
HBC16578_1
Dviv_isotig16681
CR00923
RS10776
RS06395
GR978529.1
MHC01966_1
FK802521.1
FG977402.1
EX563310.1
EX550682.1
AS10493
ES567366.1
JI168681.1
FM955429.1
GR977514.1
RSC01563_1
GR977968.1
FF681009.1
FC811858.1
FG582910.1
Name_isotig04810
FK801103.1
PPC02133_1
FF680508.1
Tcir_isotig04712
EW743550.1
FG971517.1
SRC02952_1
PT00112
EX555192.1
GR14276
NAC01934_1
FC818034.1
FG620030.1
FG587205.1
BQ804080.1
MH02374
EY463867.1
BXC06901_1
FC817047.1
FG350290.1
ASC23632_1
Name_isotig02878
EB763505.1
FC812195.1
FK808386.1
SRC01243_1
Acan_isotig01715
BU087840.1
EX913923.1
ES739886.1
TS01431
LSC00686_1
ES743509.1
FG976723.1
Acan_isotig01716
CJC02374_1
GR978158.1
FG970716.1
ES411217.1
FC812680.1
FK801026.1
ES565842.1
SR00119
GR977569.1
EX913786.1
FG974421.1
FC818005.1
Tcir_isotig23830
SC00198
FK807490.1
EX537129.1
TV00712
EX010328.1
HC01313
BUC01757_1
SR00911
GO250161.1
CR01198
HBC26638_1
TM00763
FK810046.1
EX559545.1
Tcir_isotig27724
TMC00168_1
MH05563
ASC02329_1
JK314993.1
GO252454.1
NB06518
TSC00217_1
AS07884
PPC02577_1
ES741671.1
Tcir_isotig18347
JI167879.1
FC817810.1
FG970929.1
EX910353.1
FE918404.1
DA06049
EX014373.1
OVC00090
ACC38303_1
FG588557.1
FC550935.1
EX007716.1
GR978829.1
FK800255.1
EX012106.1
ACC09915_1
FK800056.1
Acan_isotig01717
MC01854
PSC04200_1
FG978321.1
ES409110.1
GR977282.1
PP00144
CGC01500_1
FK803732.1
FG588751.1
Name_isotig03143
HGC08860_1
FG977961.1
HBC18073_1
FC818337.1
GR978933.1
Oden_isotig13927
FG977285.1
HG02171
BQ804126.1
HBC02417_1
FK809566.1
RS06336
HGC04639_1
CBC00139_1
FG970724.1
ES568333.1
CRC01250_1
GPC02652_1
HG11115
AYC04456_1
FG355661.1
FG971498.1
NB06538
MI02063
BMC04046_1
PTC00722_1
FG587540.1
FF680066.1
AE04567
DN557542.1
FC553033.1
FE918346.1
JO475081.1
Tcol_isotig23012
ASC35602
EX546107.1
Tcir_isotig04713
MCC00831_1
EW744494.1
Acan_isotig09039
GW409372.1
AYC01222_1
FG971473.1
FG980543.1
EX911909.1
JK314780.1
FG977860.1
AA294280.1
FK803745.1
FF680243.1
Hbac_isotig01455
ES744621.1
RS10014
Experimental_infoExpr_patternExpr1056517
Microarray_resultsGPL8303_CB6_WBGene00036400_A
GPL8303_CB6_WBGene00036400_B
GPL14143_CBG16478_674-733_0.919_11_C
GPL14143_CBG16478_825-884_0.926_6_B
GPL14143_CBG16478_1131-1190_0.949_1_A
Expression_clusterWBPaper00051425:CB_L4_vs_embryo_upregulated
MethodGene