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WormBase Tree Display for Gene: WBGene00030815

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Name Class

WBGene00030815SMapS_parentSequencecb25.fpc2193
IdentityVersion2
NameCGC_nameCbr-cgh-1From_analysisInferred_from_orthology
Sequence_nameCBG09177
Molecular_nameCBG09177
CBG09177.1
CBP02241
Other_nameCBG_09177Accession_evidenceNDBHE601302
Public_nameCbr-cgh-1
DB_infoDatabaseNDBlocus_tagCBG_09177
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-cgh-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcgh
RNASeq_FPKMWBls:0000002523.715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
632.756From_analysisRNASeq.briggsae.WBls:0000002.control_mean
666.202From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
708.352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1273.64From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
687.277From_analysisRNASeq.briggsae.WBls:0000002.control_median
792.977From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003654.305From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
770.57From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
886.836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
722.581From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
754.574From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004364.021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
365.892From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
367.764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
344.096From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
360.993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
399.897From_analysisRNASeq.briggsae.WBls:0000004.control_mean
562.609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002710.4383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
34.9553From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
40.7792From_analysisRNASeq.briggsae.WBls:0000027.control_mean
76.9441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
39.0266From_analysisRNASeq.briggsae.WBls:0000027.control_median
41.3589From_analysisRNASeq.briggsae.WBls:0000027.control_mean
43.098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003574.1692From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038101.55From_analysisRNASeq.briggsae.WBls:0000038.control_median
103.392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
122.464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
53.3205From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
94.7212From_analysisRNASeq.briggsae.WBls:0000038.control_mean
99.7082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000411261.8From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1544.79From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1565.67From_analysisRNASeq.briggsae.WBls:0000041.control_median
1586.55From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1683.4From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
232.461From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
215.728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
249.909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
897.349From_analysisRNASeq.briggsae.WBls:0000041.control_median
918.806From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000631012.33From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1419.78From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
870.878From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
899.116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
923.863From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
948.03From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
666.941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
911.49From_analysisRNASeq.briggsae.WBls:0000063.control_median
954.768From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101364.021From_analysisRNASeq.briggsae.total_over_all_stages.control_median
519.488From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
362.507From_analysisRNASeq.briggsae.total_over_all_stages.control_median
513.283From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134244
00134245
Ortholog (41)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and nucleic acid binding activity. Is an ortholog of C. elegans cgh-1. In C. elegans, cgh-1 is involved in several processes, including P-body assembly; determination of adult lifespan; and negative regulation of translation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09177
Corresponding_CDS_historyCBG09177:bp194
Corresponding_transcriptCBG09177.1
Other_sequence (84)
Experimental_infoExpr_patternExpr1055656
Microarray_resultsGPL8303_CB6_WBGene00030815_A
GPL8303_CB6_WBGene00030815_B
GPL14143_CBG09177_787-846_0.903_3_C
GPL14143_CBG09177_894-953_0.865_15_A
GPL14143_CBG09177_942-1001_0.863_16_B
MethodGene