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WormBase Tree Display for Gene: WBGene00037830

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Name Class

WBGene00037830SMapS_parentSequencecb25.fpc4079b
IdentityVersion2
NameCGC_nameCbr-chl-1From_analysisInferred_from_orthology
Sequence_nameCBG18394
Molecular_nameCBG18394
CBG18394.1
CBP19197
Other_nameCBG_18394Accession_evidenceNDBHE600936
Public_nameCbr-chl-1
DB_infoDatabaseNDBlocus_tagCBG_18394
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
213 Oct 2011 16:04:52WBPerson2970Name_changeCGC_nameCbr-chl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classchl
RNASeq_FPKMWBls:000000211.1904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
11.859From_analysisRNASeq.briggsae.WBls:0000002.control_mean
12.1672From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
12.2194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
10.6731From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
11.5625From_analysisRNASeq.briggsae.WBls:0000002.control_mean
11.6788From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000335.1662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
40.5981From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
46.0301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
41.4316From_analysisRNASeq.briggsae.WBls:0000003.control_mean
43.0984From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000413.4632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
13.4822From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
13.5012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
13.4602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
13.7938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
13.7986From_analysisRNASeq.briggsae.WBls:0000004.control_mean
14.7748From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.181203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.538889From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.42566From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.55688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.53034From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.94969From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.5218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.97104From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.46014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
5.37754From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.96451From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.92013From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.46272From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.55765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004121.1531From_analysisRNASeq.briggsae.WBls:0000041.control_mean
22.6942From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
24.1931From_analysisRNASeq.briggsae.WBls:0000041.control_median
25.6921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
29.8355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.39062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
11.0122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
16.8532From_analysisRNASeq.briggsae.WBls:0000041.control_median
17.4112From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.84262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006310.7124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
11.2614From_analysisRNASeq.briggsae.WBls:0000063.control_mean
18.8367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
8.18845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
8.71983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
9.8494From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
10.2809From_analysisRNASeq.briggsae.WBls:0000063.control_median
11.4774From_analysisRNASeq.briggsae.WBls:0000063.control_mean
12.5577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010111.7581From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.55765From_analysisRNASeq.briggsae.total_over_all_stages.control_median
10.2612From_analysisRNASeq.briggsae.total_over_all_stages.control_median
12.4663From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00141374
00141375
00141376
00141377
00141378
00141379
00141380
Ortholog (33)
ParalogWBGene00025337Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035859Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038895Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042796Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable several functions, including ATP binding activity; DNA binding activity; and DNA helicase activity. Predicted to be involved in nucleobase-containing compound metabolic process. Is an ortholog of C. elegans chl-1. In C. elegans, chl-1 is involved in positive regulation of cell population proliferation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18394
Corresponding_CDS_historyCBG18394:bp194
Corresponding_transcriptCBG18394.1
Other_sequence (24)
Experimental_infoExpr_patternExpr1065677
Microarray_resultsGPL8303_CB6_WBGene00037830_A
GPL8303_CB6_WBGene00037830_B
GPL14143_CBG18394_1520-1579_0.872_80_C
GPL14143_CBG18394_1945-2004_0.911_49_B
GPL14143_CBG18394_2150-2209_0.940_13_A
MethodGene