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WormBase Tree Display for Gene: WBGene00053582

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Name Class

WBGene00053582SMapS_parentSequenceCrem_Contig1
IdentityVersion3
NameCGC_nameCre-hacl-1From_analysisInferred_from_orthology
Sequence_nameCRE01740
Molecular_nameCRE01740
CRE01740.1
RP43686
Other_namecr01.sctg2.wum.366
Public_nameCre-hacl-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:44WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE01740
Other_namecr01.sctg2.wum.366
328 Jul 2021 11:12:28WBPerson1983Name_changeCGC_nameCre-hacl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhacl
RNASeq_FPKMWBls:000000419.5604From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
20.5671From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
21.5738From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024101.49From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
102.691From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
114.623From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
117.148From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
117.585From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
120.043From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
128.92From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
128.981From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
142.337From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
144.696From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
144.77From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
16.0785From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
168.85From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
21.4382From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
24.2894From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
27.5575From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
30.182From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
36.0822From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
40.5703From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
42.7727From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
45.6427From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
48.0437From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
50.2455From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
50.4342From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
52.2083From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
52.2674From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
54.1284From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
55.0302From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
56.4443From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
58.7007From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
59.2887From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
62.1573From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
62.8648From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
63.4694From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
64.5156From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
64.8132From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
66.1816From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
67.9866From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
72.3861From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
73.3989From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
76.4981From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
79.0281From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
79.6451From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
80.5437From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
82.4528From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
83.0434From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
83.8281From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
84.9044From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
87.349From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
88.3852From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
94.7819From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
98.2801From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
98.9553From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
WBls:000002717.1472From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
46.9675From_analysisRNASeq.remanei.WBls:0000027.control_mean
52.6439From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
55.773From_analysisRNASeq.remanei.WBls:0000027.control_median
58.9021From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
59.1769From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:0000038108.489From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
110.169From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
24.6642From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
81.1074From_analysisRNASeq.remanei.WBls:0000038.control_mean
WBls:0000041150.373From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
158.742From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
171.847From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
173.735From_analysisRNASeq.remanei.WBls:0000041.control_median
173.822From_analysisRNASeq.remanei.WBls:0000041.control_mean
175.623From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
187.835From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
198.514From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063111.275From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
115.059From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
119.228From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
119.61From_analysisRNASeq.remanei.WBls:0000063.control_median
119.993From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
120.117From_analysisRNASeq.remanei.WBls:0000063.control_mean
129.553From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
136.019From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
136.312From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
142.711From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
94.678From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
96.3382From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
WBls:0000101104.478From_analysisRNASeq.remanei.total_over_all_stages.control_mean
113.167From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00148815
00148816
00148817
OrthologWBGene00007143Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00025843Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00124430Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00102362Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00190777Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00193957Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00194039Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00205638Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g6190Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g7708Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11838Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3723Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15706Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g12413Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7112Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g13085Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g11424Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g14023Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g1908Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25044Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g29460Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g29808Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17810Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00486.g11417Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00486.g11418Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-B0334.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold554.g3700Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00748.g15094Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14171Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005332Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02322Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9626Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20328300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5962Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00262853Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00065685Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00073414Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable catalytic activity; magnesium ion binding activity; and thiamine pyrophosphate binding activity. Is an ortholog of C. elegans hacl-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE01740
Corresponding_transcriptCRE01740.1
Other_sequenceTDC00444_2
HBC04262_1
EW744417.1
ACC26630_1
EX014371.1
CB038027.1
EX008088.1
Oden_isotig13560
EW743460.1
FD514793.1
CJC10745_1
ES741723.1
Dviv_isotig12970
Acan_isotig11015
BXC00505_1
CSC00293_1
Tcol_isotig23589
Hbac_isotig01135
Dviv_isotig12971
CBC00468_1
Tcir_isotig20747
Acan_isotig12153
Tcol_isotig20204
Dviv_isotig12969
PPC05093_1
PP00227
Tcir_isotig20822
Oden_isotig13559
Tcol_isotig25076
FD516008.1
Experimental_infoExpr_patternExpr1108754
Microarray_resultsGPL14146_CRE01740_1588-1647_0.921_20_C
GPL14146_CRE01740_1735-1794_0.931_15_B
GPL14146_CRE01740_1836-1895_0.961_1_A
MethodGene