WormBase Tree Display for Gene: WBGene00054249

WBGene00054249 SMap: S_parent: Sequence: Crem_Contig6
  Identity: Version: 3
    Name: CGC_name: Cre-cth-2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE26455
      Molecular_name: CRE26455
        CRE26455.1
        RP25034
      Other_name: cr01.sctg3.wum.264
      Public_name: Cre-cth-2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:48 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE26455
                Other_name: cr01.sctg3.wum.264
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cre-cth-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cth
    RNASeq_FPKM: WBls:0000004 3.14843 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        3.51817 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        3.8879 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 176.777 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        20.6651 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        218.292 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        218.667 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        219.041 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        249.108 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 184.436 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        249.796 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        260.804 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        42.7086 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 136.95 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        145.165 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        148.71 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        160.47 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        189.441 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        190.621 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        95.7245 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        97.786 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 (12)
      WBls:0000101 142.061 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        157.868 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00149570
      00149571
    Ortholog (33)
    Paralog: WBGene00054295 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00075890 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00060944 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable pyridoxal phosphate binding activity. Predicted to be involved in transsulfuration. Is an ortholog of C. elegans cth-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE26455
    Corresponding_transcript: CRE26455.1
    Other_sequence (98)
  Method: Gene