WormBase Tree Display for Gene: WBGene00055730

WBGene00055730 SMap: S_parent: Sequence: Crem_Contig12
  Identity: Version: 3
    Name: CGC_name: Cre-unc-69 From_analysis: Inferred_from_orthology
      Sequence_name: CRE04587
      Molecular_name: CRE04587
        CRE04587.1
        RP29191
      Other_name: cr01.sctg5.wum.441
      Public_name: Cre-unc-69
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:58 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE04587
                Other_name: cr01.sctg5.wum.441
        3 04 Jul 2008 11:06:36 WBPerson4055 Name_change: CGC_name: Cre-unc-69
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 56.3077 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        66.5342 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        76.7608 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 107.258 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
        109.026 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
        110.378 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
        110.626 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
        111.393 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
        112.146 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
        115.53 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
        15.7616 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
        28.1608 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
        28.5364 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
        29.5828 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
        40.6014 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
        42.8271 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
        44.9865 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
        45.2662 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
        45.777 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
        45.8473 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
        45.9229 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
        46.7264 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
        46.8908 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
        54.6536 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
        55.2387 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
        57.6929 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
        59.7151 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
        60.9894 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
        62.1722 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
        62.3255 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
        63.4425 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
        64.6872 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
        65.7747 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
        65.9339 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
        68.1793 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
        68.699 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
        70.6375 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
        72.1333 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
        72.6216 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
        72.8066 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
        73.8606 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
        74.7994 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
        76.7528 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
        77.1831 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
        77.2068 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
        77.767 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
        78.1833 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
        78.191 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
        78.733 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
        80.1857 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
        80.3085 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
        89.2031 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
        90.5859 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
        91.5891 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
        96.6777 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
        97.6131 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
      WBls:0000027 2.45885 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        43.2127 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        48.798 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        52.9756 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        62.7384 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        86.782 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 33.3287 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        40.2055 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        51.0663 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        8.71421 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 118.537 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        125.304 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        160.195 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        191.84 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        198.883 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        59.4912 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        64.5355 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        76.8792 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 17.3123 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        19.3783 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        22.2037 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        24.6295 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        27.0553 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        29.6995 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        33.4511 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        40.5595 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        78.5716 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        9.03466 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        90.6966 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
      WBls:0000101 47.1395 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        58.2532 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog: WBGene00006802 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00042681 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00161369 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00109470 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00120626 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00217114 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00225889 Brugia malayi From_analysis: WormBase-Compara
      WBGene00245979 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g4327 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7270 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g14955 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9527 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15240 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2661 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15889 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3087 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22519 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g476 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00280.g8411 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-69 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold628.g7395 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00332.g9569 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13494 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010498 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08111 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g22478 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30119300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8843 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00258941 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00293073 Trichuris muris From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: Short coiled-coil protein. Is an ortholog of C. elegans unc-69. In C. elegans, unc-69 is involved in regulation of axon extension and regulation of synapse organization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE04587
    Corresponding_transcript: CRE04587.1
    Other_sequence: ES410653.1
      MC00163
      Oden_isotig15376
      CBC13385_1
      HBC09976_1
      Tcir_isotig15785
      CSC00020_1
      Dviv_isotig03275
      LSC00604_1
      FD516152.1
      TDC01802_1
      ES409135.1
      HCC02481_1
      OVC03393_1
      EY463617.1
      Tcol_isotig21559
      XIC03731_1
      EX548030.1
      Dviv_isotig03276
      DN557402.1
      Dviv_isotig03273
      ACC32484_1
      CJC05897_1
      FD516153.1
      EX535781.1
      ACC08714_1
      TSC03695_1
      FD514444.1
      TS04587
      Acan_isotig04461
      HBC21013_1
      EX551751.1
      RSC04616_1
      AW203893.1
      RS09802
      EX554237.1
      EX536847.1
      EW743181.1
      FD516021.1
      Dviv_isotig03274
      EX543168.1
      Name_isotig01136
      Hbac_isotig00212
      CB036822.1
      FD516135.1
      Acan_isotig04460
      EW743851.1
      Oden_isotig15377
      EW743779.1
      CSC00126_1
      EY469656.1
      Hbac_isotig00211
      EX547196.1
      HC04070
      XI00685
      BMC15854_1
      Tcir_isotig07598
      EX541031.1
      JI175727.1
      BMC15888_1
      MCC00321_1
  Experimental_info: Expr_pattern: Expr1116661
    Microarray_results: GPL14146_CRE04587_192-251_0.731_23_A
      GPL14146_CRE04587_75-134_0.937_2_C
      GPL14146_CRE04587_99-158_0.850_13_B
  Method: Gene