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WormBase Tree Display for Gene: WBGene00062803

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Name Class

WBGene00062803SMapS_parentSequenceCrem_Contig19
IdentityVersion4
NameCGC_nameCre-miro-1Person_evidenceWBPerson4055
From_analysisInferred_from_orthology
Sequence_nameCRE10249
Molecular_nameCRE10249
CRE10249.1
RP34368
Other_namecr01.sctg33.wum.141
Public_nameCre-miro-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:48WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE10249
Other_namecr01.sctg33.wum.141
310 Jan 2012 11:36:36WBPerson2970Name_changeCGC_nameCre-miro-3
408 Oct 2014 10:27:28WBPerson2970Name_changeCGC_nameCre-miro-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmiro
RNASeq_FPKMWBls:000000482.0955From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
86.2944From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
90.4933From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002723.7368From_analysisRNASeq.remanei.WBls:0000027.control_mean
28.2833From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
28.4576From_analysisRNASeq.remanei.WBls:0000027.control_median
28.632From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
32.1313From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
5.90063From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003820.0025From_analysisRNASeq.remanei.WBls:0000038.control_mean
25.727From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
27.7862From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
6.49441From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004133.5293From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
35.6459From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
36.934From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
53.4951From_analysisRNASeq.remanei.WBls:0000041.control_median
56.3039From_analysisRNASeq.remanei.WBls:0000041.control_mean
70.0562From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
80.6502From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
81.0078From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010125.041From_analysisRNASeq.remanei.total_over_all_stages.control_median
33.2472From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00158294
00158295
00158296
00158297
00158298
Ortholog (28)
ParalogWBGene00054399Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00058267Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00065063Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00065065Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00071928Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073271Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00075387Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00082066Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00086259Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity; GTPase activity; and calcium ion binding activity. Predicted to be involved in mitochondrion organization. Predicted to be located in mitochondrial outer membrane. Is an ortholog of C. elegans miro-1. In C. elegans, miro-1 is involved in mitochondrion organization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE10249
Corresponding_transcriptCRE10249.1
Other_sequence (25)
Experimental_infoExpr_patternExpr1098614
Microarray_resultsGPL14146_CRE10249_1125-1184_0.906_8_B
GPL14146_CRE10249_1280-1339_0.904_9_A
GPL14146_CRE10249_1375-1434_0.898_11_C
MethodGene