WormBase Tree Display for Gene: WBGene00070705

WBGene00070705 SMap: S_parent: Sequence: Crem_Contig186
  Identity: Version: 3
    Name: CGC_name: Cre-fli-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE16341
      Molecular_name: CRE16341
        CRE16341.1
        RP48575
      Other_name: cr01.sctg199.wum.16
      Public_name: Cre-fli-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:45 WBPerson2970 Name_change: CGC_name: Cre-fli-1
        3 03 Jul 2008 11:46:29 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE16341
                Other_name: cr01.sctg199.wum.16
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fli
    RNASeq_FPKM: WBls:0000004 20.3435 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        20.422 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        20.5005 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 10.107 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
        10.3574 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
        10.7609 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
        11.2517 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
        11.2749 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
        11.3635 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
        11.7002 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
        11.7311 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
        12.665 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
        12.9495 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
        13.0489 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
        5.10527 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
        5.8048 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
        5.8552 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
        5.86328 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
        6.31667 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
        6.42498 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
        6.63924 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
        6.69547 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
        6.81562 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
        6.8785 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
        6.88205 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
        6.8909 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
        7.0046 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
        7.14418 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
        7.23216 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
        7.35235 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
        7.58958 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
        7.66412 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
        7.75442 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
        7.78626 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
        7.80644 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
        7.8068 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
        7.88544 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
        7.91308 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
        8.0642 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
        8.17242 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
        8.29188 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
        8.44778 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
        8.46308 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
        8.6705 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
        8.72032 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
        8.91362 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
        8.97282 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
        9.06233 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
        9.08072 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
        9.13576 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
        9.17475 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
        9.38885 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
        9.41555 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
        9.57563 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
        9.73427 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
        9.97119 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
      WBls:0000027 10.8281 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        14.7821 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        2.84613 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        8.87513 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        9.33286 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        9.85161 From_analysis: RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 2.67003 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        5.57112 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        6.75467 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        7.28866 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 10.7798 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        11.0708 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        13.9347 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        14.3404 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        16.7986 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        17.0867 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        20.5561 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        9.75017 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 6.1498 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        7.13071 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        7.4532 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        7.54502 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        7.6458 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        7.6654 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        7.68501 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        7.75121 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        7.85874 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        8.578 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        8.90167 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
        9.74694 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
      WBls:0000101 8.72657 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        9.98147 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00164705
    Ortholog: WBGene00001443 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00023962 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00150119 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00137127 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00228477 Brugia malayi From_analysis: WormBase-Compara
      WBGene00245751 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00107461 Pristionchus pacificus From_analysis: WormBase-Compara
      CBOVI.g5602 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6771 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8272 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g8274 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10349 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15375 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25327 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1198 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g15742 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4647 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1448 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00419.g10588 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_11213.g23109 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-fli-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19560 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01285.g19858 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18412 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_21701 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008620 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08025 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g7377 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30285600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8447 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00259481 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00297289 Trichuris muris From_analysis: WormBase-Compara
      WBGene00299603 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00076554 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00071262 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00071111 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable actin filament binding activity. Is an ortholog of C. elegans fli-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE16341
    Corresponding_transcript: CRE16341.1
    Other_sequence: JI164314.1
      EG025790.1
      MHC04642_1
      FC546934.1
      SRC00221_1
      Tcol_isotig01029
      JI477231.1
      FC549902.1
      Oden_isotig19625
      Tcol_isotig01026
      HGC03554_1
      Hbac_isotig02418
      BXC04562_1
      MH05985
      HG08667
      JI483114.1
      Dviv_isotig34678
      Dviv_isotig24725
      BE132483.1
      Tcol_isotig01028
      Oden_isotig20939
      BMC08007_1
      FC811643.1
      ACC11155_1
      TMC01209_1
      FC544571.1
      MH07843
      Acan_isotig09625
      OVC06302_1
      MHC02045_1
      HG03934
      SSC03336_1
      AYC02189_1
      SS03359
      HBC27380_1
      GR13763
      Acan_isotig14296
      MH04635
      TM01527
      FC550711.1
      MH05772
      GRC03003_1
      FC817209.1
      AE03940
      Tcol_isotig01027
      SRC01551_1
      JI471799.1
  Experimental_info: Expr_pattern: Expr1110952
    Microarray_results: GPL14146_CRE16341_2343-2402_0.826_72_A
      GPL14146_CRE16341_2492-2551_0.853_40_C
      GPL14146_CRE16341_2886-2945_0.772_167_B
  Method: Gene