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WormBase Tree Display for Gene: WBGene00023962

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Name Class

WBGene00023962SMapS_parentSequencecb25.fpc0011b
IdentityVersion2
NameCGC_nameCbr-fli-1From_analysisInferred_from_orthology
Sequence_nameCBG00589
Molecular_nameCBG00589a
CBG00589a.1
CBP39733
CBG00589b
CBP41229
CBG00589c
CBP42735
CBG00589b.1
CBG00589c.1
Other_nameCBG_00589Accession_evidenceNDBHE600982
Public_nameCbr-fli-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-fli-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfli
AlleleWBVar00003309
RNASeq_FPKMWBls:000000214.5692From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
15.0515From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
15.3501From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.4295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
15.2648From_analysisRNASeq.briggsae.WBls:0000002.control_median
15.3821From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.4781From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000321.9685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
23.1047From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
24.2409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
19.5894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
21.9329From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000421.7237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
24.0317From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
26.3397From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
23.6612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
23.7784From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
24.5338From_analysisRNASeq.briggsae.WBls:0000004.control_mean
27.1662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.65114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
21.4386From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.84244From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.31073From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.3749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.10867From_analysisRNASeq.briggsae.WBls:0000027.control_median
9.57677From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003511.2835From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.9211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
12.1171From_analysisRNASeq.briggsae.WBls:0000038.control_mean
12.1461From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.3712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
21.561From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.61523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004122.8789From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
29.7176From_analysisRNASeq.briggsae.WBls:0000041.control_mean
31.7792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
31.9317From_analysisRNASeq.briggsae.WBls:0000041.control_median
32.0843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
32.128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
25.0181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
26.8604From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
28.4582From_analysisRNASeq.briggsae.WBls:0000041.control_mean
29.3198From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006315.3916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
15.8934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
16.6351From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
18.13From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
18.8185From_analysisRNASeq.briggsae.WBls:0000063.control_mean
28.0423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
15.9877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
16.3114From_analysisRNASeq.briggsae.WBls:0000063.control_median
18.3467From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010116.0276From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.9474From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
16.5323From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.9576From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127295
Ortholog (33)
ParalogWBGene00026715Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038533Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable actin filament binding activity. Is an ortholog of C. elegans fli-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG00589a
CBG00589b
CBG00589c
Corresponding_CDS_historyCBG00589:bp194
CBG00589:bp255
Corresponding_transcriptCBG00589a.1
CBG00589b.1
CBG00589c.1
Other_sequence (50)
Experimental_infoExpr_patternExpr1065733
Microarray_resultsGPL8303_CB6_WBGene00023962_A
GPL8303_CB6_WBGene00023962_B
GPL14143_CBG00589_2028-2087_0.781_36_A
GPL14143_CBG00589_3300-3359_0.789_18_B
GPL14143_CBG00589_3763-3822_0.800_5_C
MethodGene