WormBase Tree Display for Gene: WBGene00077051

WBGene00077051 SMap: S_parent: Sequence: Crem_Contig1610
  Identity: Version: 3
    Name: CGC_name: Cre-mtr-4.2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE03570
      Molecular_name: CRE03570
        CRE03570.1
        RP50203
      Other_name: cr01.sctg8550.wum.1
      Public_name: Cre-mtr-4.2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:29 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:52 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE03570
                Other_name: cr01.sctg8550.wum.1
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-mtr-4.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mtr
    RNASeq_FPKM: WBls:0000004 31.6538 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        32.3666 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        33.0794 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 1.37579 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        20.3317 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        20.6395 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        23.3785 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        26.1174 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        33.1941 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 10.9408 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        14.6182 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        14.9033 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        3.30102 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 16.7754 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        16.7873 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        24.8535 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        25.1381 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        25.2941 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        8.1535 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        8.58732 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        8.69736 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 14.6531 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        15.8212 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00169155
      00169156
      00169157
      00169158
      00169159
    Ortholog (36)
    Paralog: WBGene00062663 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00055548 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00055584 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00055586 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00059583 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00062538 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00064897 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00065562 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00076409 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity; RNA binding activity; and RNA helicase activity. Predicted to be involved in RNA catabolic process. Is an ortholog of C. elegans mtr-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE03570
    Corresponding_CDS_history: CRE03570:rp209
    Corresponding_transcript: CRE03570.1
    Other_sequence (23)
  Experimental_info: Expr_pattern: Expr1103514
    Microarray_results: GPL14146_CRE03570_3001-3060_0.936_6_B
      GPL14146_CRE03570_3115-3174_0.923_7_C
      GPL14146_CRE03570_3119-3178_0.951_1_A
  Method: Gene