WormBase Tree Display for Gene: WBGene00089902

WBGene00089902 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 7
    Name: CGC_name: Ppa-ruvb-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA00348
      Molecular_name: PPA00348
        PPA00348.1
        PP57898
      Other_name: GENEPREDICTION_SNAP300000057478
        GENEPREDICTION_SNAP300000070070
        UMM-S57-38.20 Person_evidence: WBPerson606
        Ppa-ruvb-1.1 From_analysis: Inferred_from_orthology
      Public_name: Ppa-ruvb-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:03 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:49 WBPerson4055 Event: Acquires_merge: WBGene00103173
        3 24 Nov 2017 09:46:52 WBPerson4055 Event: Acquires_merge: WBGene00204868
        4 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Ppa-ruvb-1.1
                Other_name: Ppa-ruvb-1
        5 27 Nov 2019 12:48:14 WBPerson1983 Name_change: CGC_name: Ppa-ruvb-1
                Other_name: Ppa-ruvb-1.1
        6 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Ppa-ruvb-1.1
                Other_name: Ppa-ruvb-1
        7 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Ppa-ruvb-1
                Other_name: Ppa-ruvb-1.1
      Acquires_merge: WBGene00103173
        WBGene00204868
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ruvb
    RNASeq_FPKM: WBls:0000032 1.43072 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 1.04012 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        1.43072 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        1.68963 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00173225
      00173226
      00173227
      00173228
    Ortholog (31)
    Paralog: WBGene00118240 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304844 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity; ATP-dependent activity, acting on DNA; and phosphomannomutase activity. Predicted to be involved in GDP-mannose biosynthetic process. Is an ortholog of C. elegans ruvb-1. In C. elegans, ruvb-1 is involved in several processes, including TOR signaling; box C/D snoRNP assembly; and positive regulation of translation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA00348
    Corresponding_transcript: PPA00348.1
    Other_sequence (83)
  Experimental_info: Microarray_results: GPL14372_Probes_55517
      GPL14372_Probes_55518
      GPL14372_Probes_55519
      GPL14372_Probes_55521
      GPL14372_Probes_55522
      GPL14372_Probes_55523
      GPL14372_Probes_55524
    Expression_cluster: WBPaper00041207:PP_dauer_down
      WBPaper00041466:PP_germline-ablation_regulated
  Method: Gene