WormBase Tree Display for Gene: WBGene00090004
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| WBGene00090004 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-znfx-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA00450 | ||||||||
| Molecular_name | PPA00450 | ||||||||
| PPA00450.1 | |||||||||
| PP71368 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000057580 | ||||||||
| GENEPREDICTION_SNAP300000057582 | |||||||||
| UMM-S57-45.41 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-znfx-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00090006 | ||||
| 3 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00204229 | ||||
| 4 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Ppa-znfx-1 | ||||
| 5 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-znfx-1 | ||||
| Acquires_merge | WBGene00090006 | ||||||||
| WBGene00204229 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | znfx | ||||||||
| RNASeq_FPKM | WBls:0000032 | 3.15516 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 1.06455 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 1.40657 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00173297 | ||||||||
| Ortholog (23) | |||||||||
| Paralog (29) | |||||||||
| Structured_description | Automated_description | Predicted to enable helicase activity. Is an ortholog of C. elegans znfx-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA00450 | |||||||
| Corresponding_transcript | PPA00450.1 | ||||||||
| Other_sequence (16) | |||||||||
| Experimental_info | Microarray_results (15) | ||||||||
| Expression_cluster | WBPaper00041466:PP_germline-ablation_regulated | ||||||||
| Remark | [210528 pad] The CGC name Ppa-znfx-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
