WormBase Tree Display for Gene: WBGene00091494

WBGene00091494 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 6
    Name: CGC_name: Ppa-jmjd-2 From_analysis: Inferred_from_orthology
      Sequence_name: PPA01940
      Molecular_name: PPA01940
        PPA01940.1
        PP52835
      Other_name: GENEPREDICTION_SNAP300000058254
        UMA-S421-1.51 Person_evidence: WBPerson606
      Public_name: Ppa-jmjd-2
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:03 WBPerson4055 Event: Imported: from NGASP
        2 18 Nov 2010 11:54:46 WBPerson2970 Name_change: CGC_name: Ppa-jmjd-2
        3 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Ppa-jmjd-2
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-jmjd-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: jmjd
    RNASeq_FPKM: WBls:0000032 59.7998 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 24.0412 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        27.947 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    Ortholog (31)
    Paralog: WBGene00104379 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: JmjN domain; JmjC domain, hydroxylase; Zinc finger, FYVE/PHD-type; and JmjC domain. Is an ortholog of C. elegans jmjd-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA01940
    Corresponding_transcript: PPA01940.1
    Other_sequence: AW562217.1
      Dviv_isotig21453
      PPC09188_1
      JI166997.1
      MH00933
      OVC03160_1
      PPC10749_1
      MHC02794_1
      Dviv_isotig21452
  Experimental_info: Microarray_results: GPL14372_Probes_74255
      GPL14372_Probes_74256
      GPL14372_Probes_74257
      GPL14372_Probes_74258
      GPL14372_Probes_74259
      GPL14372_Probes_74260
      GPL14372_Probes_74261
      GPL14372_Probes_74262
      GPL14372_Probes_74263
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Remark: [190208 pad] The CGC name Ppa-jmjd-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-jmjd-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene