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WormBase Tree Display for Gene: WBGene00092147

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Name Class

WBGene00092147SMapS_parentSequencePPA_ChrIII
IdentityVersion1
NameCGC_namePpa-ccdc-47From_analysisInferred_from_orthology
Sequence_namePPA02593
Molecular_namePPA02593
PPA02593.1
PP29103
Other_nameGENEPREDICTION_SNAP300000060254
UMM-S50-2.11Person_evidenceWBPerson606
Public_namePpa-ccdc-47
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:03WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classccdc
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
22.5632From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
7.52107From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00174355
00174356
00174357
Ortholog (29)
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Predicted to be involved in endoplasmic reticulum calcium ion homeostasis. Predicted to be located in endoplasmic reticulum. Is an ortholog of C. elegans ccdc-47.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA02593
Corresponding_transcriptPPA02593.1
Other_sequence (46)
Experimental_infoMicroarray_resultsGPL14372_Probes_41873
GPL14372_Probes_41874
GPL14372_Probes_41875
GPL14372_Probes_41876
GPL14372_Probes_41878
GPL14372_Probes_41879
Expression_clusterWBPaper00041207:PP_dauer_down
WBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
MethodGene