WormBase Tree Display for Gene: WBGene00092909

WBGene00092909 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 2
    Name: CGC_name: Ppa-csn-4 From_analysis: Inferred_from_orthology
      Sequence_name: PPA03355
      Molecular_name: PPA03355
        PPA03355.1
        PP26216
      Other_name: GENEPREDICTION_SNAP300000059698
        UMM-S283-3.9 Person_evidence: WBPerson606
      Public_name: Ppa-csn-4
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:03 WBPerson4055 Event: Imported: from NGASP
        2 11 Dec 2019 14:39:44 WBPerson4055 Event: Split_into: WBGene00305222
      Split_into: WBGene00305222
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: csn
    RNASeq_FPKM: WBls:0000032 36.1395 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 181.408 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        36.1395 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        72.5158 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    Ortholog (33)
    Paralog: WBGene00304257 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Winged helix DNA-binding domain superfamily; PCI domain; Winged helix-like DNA-binding domain superfamily; 26S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4; Proteasome component (PCI) domain; and COP9 signalosome complex subunit 4. Is an ortholog of C. elegans csn-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA03355
    Corresponding_CDS_history: PPA03355:pp275
    Corresponding_transcript: PPA03355.1
  Experimental_info: Microarray_results: GPL14372_Probes_44099
      GPL14372_Probes_44100
      GPL14372_Probes_44101
      GPL14372_Probes_44102
      GPL14372_Probes_44103
      GPL14372_Probes_44104
      GPL14372_Probes_44105
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Method: Gene