WormBase Tree Display for Gene: WBGene00096327
expand all nodes | collapse all nodes | view schema
| WBGene00096327 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | Ppa-mog-2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA06773 | ||||||||
| Molecular_name | PPA06773 | ||||||||
| PPA06773.1 | |||||||||
| PP63870 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000063139 | ||||||||
| Ppa-sap-1 | From_analysis | Inferred_from_orthology | |||||||
| UMA-S41-4.31 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-mog-2 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 05 May 2011 12:20:47 | WBPerson2970 | Name_change | CGC_name | Ppa-mog-2 | ||||
| Other_name | Ppa-sap-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mog | ||||||||
| RNASeq_FPKM | WBls:0000032 | 22.0777 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 16.8582 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 22.0777 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 28.4969 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Leucine-rich repeat; Armadillo-type fold; U2A'/phosphoprotein 32 family A, C-terminal; Uncharacterised domain NUC173; NUC173 domain; Leucine-rich repeat domain superfamily; Protein of unknown function (DUF778); and TMEM222/RTE1. Is an ortholog of C. elegans mog-2. In C. elegans, mog-2 is involved in feminization of hermaphroditic germ-line; germline cell cycle switching, mitotic to meiotic cell cycle; and mRNA 3'-splice site recognition. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA06773 | |||||||
| Corresponding_transcript | PPA06773.1 | ||||||||
| Other_sequence (54) | |||||||||
| Experimental_info | Microarray_results (11) | ||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
| WBPaper00041207:PP_dauer_up | |||||||||
| WBPaper00041466:PP_germline-ablation_regulated | |||||||||
| Method | Gene |
