WormBase Tree Display for Gene: WBGene00096465
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| WBGene00096465 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 7 | |||||||
| Name | Sequence_name | PPA06911 | |||||||
| Molecular_name | PPA06911 | ||||||||
| PPA06911.1 | |||||||||
| PP54820 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000064298 | ||||||||
| GENEPREDICTION_SNAP300000064299 | |||||||||
| UMM-S139-21.41 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA06911 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00096466 | ||||
| 3 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| 4 | 08 Feb 2019 15:42:26 | WBPerson1983 | Name_change | CGC_name | Ppa-elpc-4 | ||||
| 5 | 08 May 2019 10:09:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-elpc-4 | ||||
| 7 | 28 Jul 2021 11:12:30 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Acquires_merge | WBGene00096466 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 5.21367 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 10.6318 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 26.6817 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 5.21367 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| GO_annotation | 00176470 | ||||||||
| 00176471 | |||||||||
| 00176472 | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00090658 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00105824 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00281659 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00304609 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable GTP binding activity. Predicted to be involved in tRNA wobble uridine modification. Predicted to be part of elongator holoenzyme complex. Is an ortholog of C. elegans elpc-4 and mtg-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA06911 | |||||||
| Corresponding_transcript | PPA06911.1 | ||||||||
| Other_sequence (38) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_9207 | |||||||
| GPL14372_Probes_9208 | |||||||||
| GPL14372_Probes_9209 | |||||||||
| GPL14372_Probes_9210 | |||||||||
| GPL14372_Probes_9211 | |||||||||
| Expression_cluster | WBPaper00041466:PP_germline-ablation_regulated | ||||||||
| Remark | [180319 gw3] The CGC name Ppa-elpc-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
| [190507 pad] The CGC name Ppa-elpc-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| [210728 pad] The CGC name Ppa-elpc-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
