WormBase Tree Display for Gene: WBGene00096575
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| WBGene00096575 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | Ppa-impt-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA07021 | ||||||||
| Molecular_name | PPA07021 | ||||||||
| PPA07021.1 | |||||||||
| PP70137 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000064408 | ||||||||
| UMM-S139-27.32 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-impt-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 01 Jun 2015 15:58:01 | WBPerson2970 | Name_change | CGC_name | Ppa-impt-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | impt | ||||||||
| RNASeq_FPKM | WBls:0000032 | 5.54375 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 3.911 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 5.54375 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 6.18924 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| Ortholog (29) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Uncharacterized protein family UPF0029; Impact, N-terminal domain superfamily; Ubiquitin-conjugating enzyme/RWD-like; Impact family; Impact, N-terminal; Ribosomal protein S5 domain 2-type fold; and RWD domain. Is an ortholog of C. elegans impt-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA07021 | |||||||
| Corresponding_transcript | PPA07021.1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_54305 | |||||||
| GPL14372_Probes_54307 | |||||||||
| GPL14372_Probes_54308 | |||||||||
| Expression_cluster | WBPaper00041466:PP_germline-ablation_regulated | ||||||||
| Method | Gene |
