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WormBase Tree Display for Gene: WBGene00096809

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Name Class

WBGene00096809SMapS_parentSequencePPA_ChrIV
IdentityVersion2
NameCGC_namePpa-arp-11From_analysisInferred_from_orthology
Sequence_namePPA07255
Molecular_namePPA07255
PPA07255.1
PP64538
Other_nameGENEPREDICTION_SNAP300000063732
UMM-S233-18.43Person_evidenceWBPerson606
Public_namePpa-arp-11
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
218 Aug 2010 14:37:20WBPerson2970Name_changeCGC_namePpa-arp-11
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classarp
RNASeq_FPKMWBls:000003217.1578From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010113.6From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
17.1578From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
23.6422From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Ortholog (30)
ParalogWBGene00098673Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099259Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099729Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103688Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00202780Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272225Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273758Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275837Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276137Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304882Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Actin-related protein 10; ATPase, nucleotide binding domain; Actin; and Actin family. Is an ortholog of C. elegans arp-11.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA07255
Corresponding_transcriptPPA07255.1
Other_sequenceJI166173.1
PPC19932_1
Oden_isotig19061
JO469011.1
Experimental_infoMicroarray_resultsGPL14372_Probes_80017
GPL14372_Probes_80018
GPL14372_Probes_80019
GPL14372_Probes_80020
GPL14372_Probes_80021
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
WBPaper00041466:PP_S.marcescens_regulated
WBPaper00041606:PP_X.nematophila_regulated
MethodGene