WormBase Tree Display for Gene: WBGene00097641
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| WBGene00097641 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-riok-3 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA08087 | ||||||||
| Molecular_name | PPA08087 | ||||||||
| PPA08087.1 | |||||||||
| PP71723 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000064572 | ||||||||
| GENEPREDICTION_SNAP300000075092 | |||||||||
| GENEPREDICTION_SNAP300000076733 | |||||||||
| UMM-S66-11.3 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-riok-3 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-riok-3 | ||||
| 3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00104950 | ||||
| 4 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00109471 | ||||
| 5 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-riok-3 | ||||
| Acquires_merge | WBGene00104950 | ||||||||
| WBGene00109471 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | riok | ||||||||
| RNASeq_FPKM | WBls:0000032 | 10.9177 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 10.9177 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 16.055 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| 37.2474 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00176998 | ||||||||
| 00176999 | |||||||||
| 00177000 | |||||||||
| 00177001 | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00105668 | Pristionchus pacificus | From_analysis | Inparanoid_8 | |||||
| WBGene00096980 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity; protein serine/threonine kinase activity; and protein tyrosine phosphatase activity. Is an ortholog of C. elegans riok-3. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA08087 | |||||||
| Corresponding_transcript | PPA08087.1 | ||||||||
| Other_sequence (53) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_47668 | |||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| WBPaper00041466:PP_germline-ablation_regulated | |||||||||
| Remark | [180319 gw3] The CGC name Ppa-riok-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
| Method | Gene |
