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WormBase Tree Display for Gene: WBGene00097978

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Name Class

WBGene00097978SMapS_parentSequencePPA_ChrI
IdentityVersion3
NameSequence_namePPA08424
Molecular_namePPA08424
PPA08424.1
PP58196
Other_nameGENEPREDICTION_SNAP300000064904
UMM-S139-10.42Person_evidenceWBPerson606
Public_namePPA08424
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
229 Apr 2015 12:22:06WBPerson2970Name_changeCGC_namePpa-icmt-1
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.42968From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
4.28905From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00177179
00177180
00177181
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to enable protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity. Predicted to be located in membrane. Is an ortholog of C. elegans M01E11.1 and icmt-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA08424
Corresponding_transcriptPPA08424.1
Other_sequencePPC16123_1
Acan_isotig06883
HGC05913_1
Acan_isotig06884
Tcir_isotig17629
Oden_isotig27841
CRC11862_1
Experimental_infoMicroarray_resultsGPL14372_Probes_88071
GPL14372_Probes_88072
GPL14372_Probes_88073
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
Remark[180319 gw3] The CGC name Ppa-icmt-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene