WormBase Tree Display for Gene: WBGene00098029
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WBGene00098029 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 9 | |||||||
Name | CGC_name | Ppa-dcs-1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA08475 | ||||||||
Molecular_name | PPA08475 | ||||||||
PPA08475.1 | |||||||||
PP68818 | |||||||||
Other_name | GENEPREDICTION_SNAP300000064959 | ||||||||
GENEPREDICTION_SNAP300000070949 | |||||||||
GENEPREDICTION_SNAP300000070950 | |||||||||
GENEPREDICTION_SNAP300000070952 | |||||||||
GENEPREDICTION_SNAP300000070953 | |||||||||
UMM-S71-12.86 | Person_evidence | WBPerson606 | |||||||
Ppa-trx-2 | Inferred_automatically | from gene merge | |||||||
Public_name | Ppa-dcs-1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-trx-2 | ||||
3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00103706 | ||||
4 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00103707 | ||||
5 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00103709 | ||||
6 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00103710 | ||||
7 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-dcs-1 | ||||
Other_name | Ppa-trx-2 | ||||||||
8 | 08 May 2019 10:09:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
9 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-dcs-1 | ||||
Acquires_merge | WBGene00103706 | ||||||||
WBGene00103707 | |||||||||
WBGene00103709 | |||||||||
WBGene00103710 | |||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dcs | ||||||||
RNASeq_FPKM | WBls:0000032 | 3.12327 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 12.5402 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
3.12327 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
5.22116 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
GO_annotation | 00177199 | ||||||||
00177200 | |||||||||
Ortholog (40) | |||||||||
Structured_description | Automated_description | Predicted to enable hydrolase activity. Predicted to be involved in deadenylation-dependent decapping of nuclear-transcribed mRNA. Is an ortholog of C. elegans dcs-1. In C. elegans, dcs-1 is involved in nucleobase-containing compound metabolic process; response to heat; and sulfur compound metabolic process. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA08475 | |||||||
Corresponding_transcript | PPA08475.1 | ||||||||
Other_sequence (84) | |||||||||
Experimental_info | Microarray_results (18) | ||||||||
Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
WBPaper00041466:PP_germline-ablation_regulated | |||||||||
Remark | [190507 pad] The CGC name Ppa-dcs-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
Method | Gene |