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WormBase Tree Display for Gene: WBGene00099236

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Name Class

WBGene00099236SMapS_parentSequencePPA_ChrV
IdentityVersion1
NameSequence_namePPA09682
Molecular_namePPA09682
PPA09682.1
PP09558
Other_nameGENEPREDICTION_SNAP300000066216
UMM-S371-1.69Person_evidenceWBPerson606
Public_namePPA09682
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000032171.449From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101130.956From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
171.449From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
221.419From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
OrthologWBGene00009367Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WBGene00020588Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WBGene00038904Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WBGene00042456Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00060884Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WBGene00158740Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00122455Caenorhabditis japonicaFrom_analysisInparanoid_8
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Methyl-CpG-binding domain protein 2/3, p55-binding region; Methyl-CpG-binding domain protein 3; p55-binding region of Methyl-CpG-binding domain proteins MBD; C-terminal domain of methyl-CpG binding protein 2 and 3; and Methyl-CpG binding protein 2/3, C-terminal domain. Is an ortholog of C. elegans F33H2.3 and T19H12.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA09682
Corresponding_transcriptPPA09682.1
Other_sequenceNB07912
HC07573
NBC00235_1
Tcir_isotig02838
Tcir_isotig02837
PPC00576_1
PP01586
JI172916.1
HCC07688_1
PPC08571
Experimental_infoMicroarray_resultsGPL14372_Probes_42954
GPL14372_Probes_42955
GPL14372_Probes_42956
GPL14372_Probes_42957
GPL14372_Probes_42958
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
ReferenceWBPaper00024878
WBPaper00045838
WBPaper00056525
MethodGene