WormBase Tree Display for Gene: WBGene00099246

WBGene00099246 SMap: S_parent: Sequence: PPA_ChrV
  Identity: Version: 2
    Name: CGC_name: Ppa-cup-2 From_analysis: Inferred_from_orthology
      Sequence_name: PPA09692
      Molecular_name: PPA09692
        PPA09692.1
        PP37050
      Other_name: GENEPREDICTION_SNAP300000066226
        UMA-S371-1.80 Person_evidence: WBPerson606
        Ppa-rps-21 From_analysis: Inferred_from_orthology
      Public_name: Ppa-cup-2
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:04 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Ppa-cup-2
                Other_name: Ppa-rps-21
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cup
    RNASeq_FPKM: WBls:0000032 62.3627 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 30.3303 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        30.8977 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00177763
      00177764
      00177765
    Ortholog (28)
    Paralog: WBGene00275906 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Is an ortholog of C. elegans cup-2. In C. elegans, cup-2 is involved in endocytosis and response to misfolded protein. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA09692
    Corresponding_transcript: PPA09692.1
    Other_sequence (340)
  Experimental_info: Microarray_results: GPL14372_Probes_42959
      GPL14372_Probes_42960
      GPL14372_Probes_42965
      GPL14372_Probes_42966
      GPL14372_Probes_42967
      GPL14372_Probes_42968
      GPL14372_Probes_42969
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_S.marcescens_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Method: Gene